Salmo salar (Atlantic salmon): 100136430
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Entry
100136430 CDS
T04363
Symbol
CH60, hsp60
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100136430 (CH60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100136430 (CH60)
03110 Chaperones and folding catalysts [BR:
sasa03110
]
100136430 (CH60)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
100136430 (CH60)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100136430 (CH60)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100136430 (CH60)
Messenger RNA biogenesis [BR:
sasa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100136430 (CH60)
Chaperones and folding catalysts [BR:
sasa03110
]
Heat shock proteins
HSP60 / Chaperonin
100136430 (CH60)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100136430 (CH60)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100136430 (CH60)
Exosomal proteins of other body fluids (saliva and urine)
100136430 (CH60)
Exosomal proteins of breast cancer cells
100136430 (CH60)
Exosomal proteins of colorectal cancer cells
100136430 (CH60)
Exosomal proteins of bladder cancer cells
100136430 (CH60)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
100136430
NCBI-ProteinID:
XP_014020745
UniProt:
A0A1S3NZN6
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All DBs
Position
ssa21:complement(43349918..43356751)
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AA seq
587 aa
AA seq
DB search
MASLLVCFSSIFQMLRLPTVMRQMRPVCRALAPHLTRAYAKDVKFGADARAMMLKGVDLL
ADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNE
EAGDGTTTATVLARAIAKEGFDTISKGANPVEIRRGVMLAVETVIAELKRMSKPVTTPEE
IAQVATISANGDVEIGAIISNAMKKVGRKGVITVKDGKTLHDELEIIEGLKFDRGYISPY
FINTAKGQKCEFQDAYVLLSEKKISTVQSIVPALELANQHRKPLVIVAEDVDGEALSTLV
LNRLKVGLQVVAVKAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGQVGE
VSVTKDDTMLLKGKGDTASIEKRQAQIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVG
GTSDVEVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINADQKIGIDI
IRRALRVPAMTIAKNAGVEGSLVVEKILQAAVEIGYDAMEGEYVNMVEKGIIDPTKVVRT
ALMDAAGVASLLSTAECVVTELPKEEKEGGGMPGGMGGMGGMGGGMF
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctacttgtctgtttctccagtattttccagatgctgcgtctacccacggtg
atgagacagatgaggccggtctgcagggccctggccccccacctcacccgagcctacgcc
aaggacgtcaagtttggagccgatgctcgggccatgatgctgaagggagtggatctgctg
gctgatgctgtcgccgtcaccatgggtcccaagggtcgcacagtaatcatcgagcagagc
tggggcagccccaaggtgaccaaggatggtgtcactgtagccaaggccattgacctgaag
tgcaagtaccaaaacatcggtgccaagctggtccaggacgtggccaacaacacaaacgag
gaagcgggagatggcaccaccactgccaccgtgctggccagagccatcgccaaggagggc
tttgacaccatcagtaaaggagctaaccctgtggagatccgccgtggcgtcatgctggct
gtggagaccgtcattgctgaactgaagaggatgtctaagccagtcaccacacctgaggag
attgcccaggtggccaccatctctgctaatggagacgtggagatcggcgccatcatctcc
aacgccatgaaaaaagtgggccgcaagggagtcatcactgtcaaggatggtaaaaccctg
catgatgagcttgagatcattgaggggctgaagttcgaccgtggatacatctccccttac
ttcatcaacacagccaaaggacagaagtgtgagtttcaggatgcctatgtgttgctgagt
gagaagaagatctctactgtccagagcatcgtccctgccctggaattggccaaccagcac
cgcaaacctctggtcatcgtggccgaggacgtggacggagaggccctcagcaccctggtt
ctcaacaggctgaaggtgggactacaagtggtggcagtcaaggccccaggctttggagac
aacaggaaggcccagctgcacgacatggccgtcgccaccgggggcactgtgtttggtgat
gaggcggtgggcattgccctggaggacatccaggcccatgactttggccaggtgggcgag
gtgtcagtgaccaaggacgacaccatgctgctgaaggggaagggagacacggcatccatc
gagaagaggcaggctcagatcgttgagcagctggagaacaccaccagcgactacgagaag
gagaagctcaacgaaaggctggccaagctgtctgatggagtggctgtgctcaaggtggga
ggaacgagtgatgtggaggtgaatgagaagaaggaccgtgtgaccgacgccctgaatgcc
accagggccgctgtggaggagggcatcgtgcccgggggtggctgtgccctgctgcgctca
atccctgccctggatgccctcgtgcccatcaatgctgaccagaagattggaattgacatc
atcagacgagccctgcgtgtgccagccatgacaattgctaagaacgctggtgtggagggc
tctctagtggtagagaagatccttcaggccgcggtggagatcggctacgatgccatggaa
ggagagtacgtcaacatggtagagaagggcatcattgaccccaccaaggtggtgaggact
gcactaatggatgctgcaggtgttgcatcccttctctccactgctgagtgtgtggtcaca
gagctgcccaaggaggagaaggagggtggcggcatgccaggaggtatgggcggtatggga
ggtatgggcggtggcatgttctaa
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