Salmo salar (Atlantic salmon): 100136523
Help
Entry
100136523 CDS
T04363
Symbol
tr-alpha, Thra, nr1a1, thra1
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04080
Neuroactive ligand-receptor interaction
sasa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100136523 (tr-alpha)
04081 Hormone signaling
100136523 (tr-alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100136523 (tr-alpha)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
100136523 (tr-alpha)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100136523 (tr-alpha)
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
100136523 (tr-alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100136523
NCBI-ProteinID:
NP_001117100
UniProt:
Q9W785
A0A1S2WZ42
LinkDB
All DBs
Position
ssa03:complement(52911950..53017293)
Genome browser
AA seq
416 aa
AA seq
DB search
MEPISNVEDPNSSEGDEKRWPDGPKRKRKNSTCSVKSMSALSLSVQGYIPSYLEKDEPCV
VCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFRK
CIAVCMAMDLVLDDSKRVAKRRLIEENREKRKKDEIVKTLQARPEPDSSEWELIRHVTEA
HRHTNAQGSHWKQKRKFLPEDIGQSPRAPTPDGDKVDLEAFSEFTKIITPAITRVVDFAK
KLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV
VSDAIFDLGKSLAQFNLDDSEVALLQAVLLMSSDRSGLTLVDKIEKCQETYLLAFEHYIN
HRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttccaacgtcgaggaccccaactcatcagagggagatgagaaacggtgg
cctgatggcccaaaaaggaagagaaagaacagcacatgttcggtgaagagcatgtctgca
ctgagcctctctgtccaaggatatatccccagctacttggagaaggatgagccgtgtgtg
gtgtgtggagacaaggccaccggctaccattaccgctgcatcacctgcgagggctgcaag
ggtttcttcaggcgcactatccagaagaaccttcacccggcttactcctgtaagtacgat
ggctgctgcatcatcgacaagatcacaaggaaccagtgccaactgtgtcgcttcaggaaa
tgcatcgcagtttgcatggccatggacctggtgctggacgactctaagcgggtagccaag
cggcgtctgattgaggagaaccgggagaagaggaagaaggatgagattgtgaagaccctg
caggcgcgtccggagcccgacagctcggagtgggagctgattcgccatgtgacagaggcc
caccgccacaccaacgcgcagggctcccactggaaacagaaacgcaagttcctgcctgag
gacataggtcagtccccccgggctcccaccccagacggagacaaggtagacctggaggcc
ttcagcgagttcaccaagatcatcacccctgccatcacacgcgtcgtcgactttgccaaa
aaactgcccatgttctcagagctgccttgtgaggaccagatcatcctattgaaaggctgc
tgtatggagatcatgtctttgcgcgccgccgtgcgctacgacccagagagcgagacgctt
accctgagcggcgagatggcggtgaagagggagcagctgaagaatggcggcctgggcgtg
gtgtcggacgccatctttgatttgggcaagagtctggcacagtttaacctggacgactcg
gaggtggccctgctgcaggctgtgctcctcatgagctcagatcgctcgggcctgacgttg
gtagataagatcgagaagtgccaggagacgtacctgcttgccttcgagcactacatcaac
caccgcaagcacaacattccccacttctggcccaagctgctgatgaaggtgacagacctg
aggatgatcggggcgtgccacgccagccgcttcctccacatgaaggtggagtgtcccaac
gaactcttccctccgctcttcctggaggtcttcgaggaccaggaagtatga
DBGET
integrated database retrieval system
