Salmo salar (Atlantic salmon): 100136526
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Entry
100136526 CDS
T04363
Symbol
pparb1B
Name
(RefSeq) peroxisome proliferator-activated receptor delta
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03320
PPAR signaling pathway
sasa04148
Efferocytosis
sasa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100136526 (pparb1B)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100136526 (pparb1B)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100136526 (pparb1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100136526 (pparb1B)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
100136526 (pparb1B)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100136526 (pparb1B)
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
100136526 (pparb1B)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HiaBD2
Motif
Other DBs
NCBI-GeneID:
100136526
NCBI-ProteinID:
XP_013987341
UniProt:
A0A1S3L8N1
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Position
ssa12:complement(45976076..46014399)
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AA seq
538 aa
AA seq
DB search
MEGTRATILPPVRSDGPRRDRKRRVGCPVRKGGVCQNRTASPHGECTSDGEREPESALKE
LKPNLLSKGLGKWDTEGERGAEVSPEGEDGLCSWEMDSQDEEAQQQEKEEEKQKGSSNSH
STSNTDSPAPSSSCTDLSQTSSPSLSDQLFLGREEGTGAGINVECRICGDKASGFHYGVH
ACEGCKGFFRRTIRMKLEYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGRMP
EAEKRKLVAGLLAGDTAPTTNPNGSDLKSLAKRVNNAYLKNLNMTKKKARSILTGKNSSS
PVAYPYPFVIHDMDSLHQAENGLVWNQLINGTPPNKEIGVHVFYRCQCTTVETVRELTEF
AKSIPGFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRRP
FSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLMNIKQVEEIQDSILQALDQ
HLLGNHADSHYLFPKLLNKMADLRQLVTENAMLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaccagggccaccatcttgccgccggtcagaagcgacggcccccgacgggat
cggaagcggcgtgtcgggtgtcctgtaaggaaggggggtgtctgccagaacaggaccgcc
tccccacatggggagtgcacctcggacggagagagggagccggagtcagccttgaaggaa
ctgaaaccaaacctgctgtcgaaggggctgggcaaatgggatactgagggggagcgagga
gcagaggtgtcgcctgagggtgaggacggcctttgctcctgggaaatggactctcaggac
gaggaggcgcagcagcaggagaaagaggaggagaaacagaaggggagtagtaacagccac
agcacctccaatacggatagccctgccccctccagcagctgcacagatctgtcccagacg
tcgtctccatcgctgtcggaccagctcttcctgggtcgagaggaagggacgggggccggg
atcaatgtggaatgtcggatctgtggagacaaagcctcggggttccactacggagtacac
gcttgtgaaggctgcaagggctttttccgccggaccatccgtatgaagctggagtatgag
cgctgtgagcgcagctgtaagatccagaagaagagcaggaacaagtgccagtactgccgc
ttccagaagtgcctgctgctaggcatgtcccacgacgcgatccggtacggccgcatgccg
gaggcggagaagaggaagctggtggcaggcctcctggcaggagatacggctccgaccacc
aaccccaacggctcggacctcaaatccctggccaagcgggtcaacaacgcctacctgaag
aacctcaacatgaccaagaagaaagctcgcagcatcctcaccggcaagaatagctccagc
ccggtagcgtatccatatccctttgtgatccacgacatggactcgttgcaccaggctgag
aacgggctggtgtggaaccagctgatcaacgggacgccgcccaacaaggagataggggtt
cacgtgttctaccgctgccagtgcaccacggtggagacggtcagggagctcacggagttc
gccaagagcatccccggctttgtagacctcttcctcaacgaccaggtgacgctgttgaaa
tacggcgtgcatgaggctatcttcgccatgcttccctcactcatgaacaaggatgggctg
ctggtggccaacgggaagggctttgtgacccgggagttcctgcgcagcctgcggcggccc
tttagcgagatcatggagcccaagtttgagtttgccgttaagttcaacgccctggagctg
gacgacagtgacctggccctgtttgtggccgccatcatcctctgtggagaccgtccgggg
ctgatgaacatcaagcaggtggaggagattcaggacagcatcctgcaggccctagaccag
cacctgctgggcaaccatgctgactcacattacctcttccccaagctgctcaacaagatg
gccgacctgcgccagctggtcacagagaacgccatgctggtccagaagattaagaagact
gagtcagagacctcactgcacccgctgctgcaggagatctacaaggacatgtactga
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