KEGG   Salmo salar (Atlantic salmon): 100136586
Entry
100136586         CDS       T04363                                 
Symbol
hnf1a, hnf1, tcf1
Name
(RefSeq) HNF1 homeobox A
  KO
K08036  transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    100136586 (hnf1a)
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    100136586 (hnf1a)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N HNF-1A_C Homeodomain Telethonin Homeobox_KN HTH_37
Other DBs
NCBI-GeneID: 100136586
NCBI-ProteinID: NP_001117146
UniProt: Q91474 A0A1S2WYW7
LinkDB
Position
ssa20:19523143..19530228
AA seq 559 aa
MEGEERKGEAGPGPGRLSALQEQLIWALLGSGLSREVLVHALGELERERVTPGAEKGDRG
DGESSEEGEMDFPPPIFQELEALAPEEAARQRALVDQLLQEDPWRVAKLVKSYMQQHNLP
QREVVESIGLNQSHLSQHLNKGTPMKNQKRAALYSWYVRKQGEISQQFTNARHALGSGEE
QGEDVRKGRRNRFKWGPASQQILFHAYERQRNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDMPYNSQSASSTNHTLSHSPEQGMKYSQ
QITCDNLGSSRGHNGDRGLGGRLASPIQLEPSHTLLETHHHKPVSGGGPLPPVSTLTSLH
SLSASPAPHHGLIMTSLPSVMSLGESSLLIGQTVPVINNVGGGFTTLQPISFQQQLHSTS
QQQLTQQFQSHMGHHHSPFMATMAQLPCHMYSKSDMSHYPPSSLLSQAMVITDSSSLGTL
TSLTTVRQILTTDPEEQTDQPIQEDSLHLQSPSPVPVSSGNLQLYPPSQSSESHPPHRLS
SSPADINSYIPAQMVSTAQ
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggagggagaggagaggaaaggagaagcagggcccggccctggtcgtctgtctgctctc
caggagcagctgatctgggctctgctgggctctggactgtcccgggaggtcctggtccat
gccctgggagaactggagcgagagagggtcacccctggagcagagaagggggacaggggg
gatggcgagagttcggaggaaggagaaatggattttccacccccaatattccaggagctg
gaggccctagccccagaggaggcagccaggcagagggctctggtcgaccaactgcttcag
gaggatccatggcgcgtggcaaaactggtgaagagctacatgcagcagcataacctcccc
cagagagaggtggtcgaatccataggcctcaaccagtcccatctctcccagcacctcaac
aaaggcacgcccatgaagaaccagaaacgggctgctttgtacagctggtacgtcaggaag
cagggcgagattagccagcagtttactaatgccaggcatgcccttgggtctggagaggag
cagggagaggacgtgaggaagggacgtaggaacaggttcaaatggggacccgcctcccag
caaatcctcttccacgcctatgaacgacagaggaacccaagcaaagaggagagagaggga
ttagtggaggagtgtaacagggctgagtgtctccagaggggtgtgtctccgtcccagctg
gctggcctgggctctaacttagtgacagaggtacgagtgtacaactggttcgctaaccgc
cgcaaggaggaagccttccgccataaactggctcttgatatgccttacaacagccaatca
gcaagctccaccaaccacacgctctcacacagccctgagcaaggcatgaagtatagccag
caaatcacatgtgataatctggggtcatcgaggggtcacaatggagacagaggcttgggg
ggccgcctggccagccccattcaactggagcccagccacacactcctggaaacacaccat
cacaaaccagtatcaggtggtggccccttgcccccagtcagcaccctgacatcactgcac
agtctgtctgcctcgcctgctccccaccatggactcatcatgacctccctgcccagcgtc
atgagtctgggagagtcctctctcctcataggtcaaaccgtacctgtcatcaacaatgtg
ggaggcgggttcaccacccttcagccaatctctttccagcagcagcttcattccacttcc
cagcagcaactcacacagcagttccagagtcatatgggccaccaccacagtcctttcatg
gcaaccatggcacagcttccatgtcacatgtacagcaagtctgatatgtcccactaccct
ccgtccagcctactgtcccaagcaatggtcatcactgacagcagcagccttggaacactg
accagtctaaccacagtcagacagattctgaccacagaccctgaggagcagacagaccaa
cccatccaggaggactccctacacctgcagtccccttcacctgtgccagtttcctctggg
aatttacagctgtatcctccatctcagtctagtgaaagtcatccacctcaccgcctctcc
tcttcgccagcagacatcaactcctacattcctgcacagatggtctctaccgcacagtag

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