Salmo salar (Atlantic salmon): 100136924
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Entry
100136924 CDS
T04363
Symbol
tap2b, ABCB3, TAP2a
Name
(RefSeq) transport-associated protein 2b
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa02010
ABC transporters
sasa04145
Phagosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100136924 (tap2b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100136924 (tap2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100136924 (tap2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
100136924 (tap2b)
Enzymes [BR:
sasa01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100136924 (tap2b)
Transporters [BR:
sasa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100136924 (tap2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
Rad17
AAA_30
SbcC_Walker_B
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
100136924
NCBI-ProteinID:
XP_014032814
UniProt:
A0A1S3Q025
LinkDB
All DBs
Position
ssa27:10176035..10180872
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AA seq
726 aa
AA seq
DB search
MMLRMCAFAMAVGLCIDITTFCAPCFGESISETGPITFGTFGNVVRLWVVAGIRLVLLLG
LTLLTLGSIKPVFKRWLAVHCFLAPVYETGRRMLYGSSPERVYGSLGLGSPSLWLLCTAA
AAAAALFWETTFPDSNGESNGKQKTQKARVLFMRVLYFYRPDTLLLVGAFIFLSLAVLCE
MFIPFYTGKVIDILGTQYKWNNFLTAIILMGLYSLGSSFSAGCRGGLFMCAINSFTCRMK
VELFGALVKQEIGFFETIKTGDITSRLSTDTTLMGRAVALNVNVLLRTLIKTVGMLSLMM
SLSWKLTLLMLMETPITGLLQSVHDNYYQRLSKEVQDSMARANEAAGETVGGIRTVRSFK
TEQHEAGRYNDRLMDTHNLKTRRDTVRAVYLLLRRLTAVVMQVAMLYYGRLFIQRGQMST
GNLVSFILYQSDLADNIRTLIYIFGDMLNSVGAAGKVFEYLDREPQVSTKGTLQPETLTG
HVHFNNLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGE
ILLDGLPLQSYQHHYLHRKIAMVGQEPVLFSGSIKDNIAYGLADCSLERVQEAARRANAH
SFISQLEKGYDTDVGERGGQLSGGEKQRIAIARALIREPQVLILDEVTSALDTESEHMVQ
EALASCPSQTLLVIAHRLKTIERADQIILIDQGTVQEQGTHQELMDRKGSYYKLKERLFT
EDDAPH
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttagaatgtgcgcgttcgctatggctgtaggtctatgcattgacataaccaca
ttttgcgcaccgtgttttggcgaatctatttctgaaactggaccaataacatttggtact
ttcggaaatgtggtgcgtctatgggttgtagcggggattcggttagttctactactcggt
ttaacgctactcacactaggatcgataaaacccgtattcaagcgctggttagcggtgcac
tgtttccttgccccggtctatgagactgggcgacgtatgctgtatggaagttcaccggag
cgcgtgtatggatctttgggtctggggagtccaagtttgtggctattgtgtaccgcggca
gcagctgcagcagccttattttgggagacaaccttccctgacagcaatggagaaagtaac
gggaaacagaagacgcagaaggcacgagtgctgttcatgagagtcctctacttctacaga
cctgacaccctccttttggttggggcatttatattcctgtcactggctgtcctctgtgag
atgttcatcccattctacactggaaaagtgattgacatcttgggtacccagtacaagtgg
aataactttctcacagcaatcatcctcatggggctttactctttgggaagctctttcagt
gcaggctgtcgtggaggcctcttcatgtgtgctatcaacagcttcacctgcagaatgaaa
gtagaactgtttggggccctggtgaagcaggagatcggcttctttgagaccatcaagaca
ggtgacatcacgtcccggctgtccacagacaccaccctgatgggccgggcggtggccctg
aatgtcaacgtcctactgaggaccctcattaagaccgtgggtatgctgtcgctcatgatg
agcctgtcctggaagctcactctgctcatgctgatggagacgcccatcaccggcctgttg
caaagcgtccatgacaactattaccagaggctctctaaggaggttcaggactctatggcc
agggcgaacgaggcagcgggggaaacagttggcggaatccggaccgtacgaagcttcaaa
actgagcagcatgaggctggtcgctataacgacaggttgatggacacccacaatctcaag
accaggcgggacaccgtcagggcagtctacctgctcctgagaagactaacagcagtggta
atgcaggtggccatgctgtactatggcagactgtttatccagcgaggtcagatgagcact
ggcaacctggtctctttcatcctctaccagtctgatctggcagacaatatcaggactttg
atttacatttttggcgacatgctgaattcagtgggggcagctggtaaggtgtttgagtac
ctggacagagagccccaggtcagcaccaaggggaccctccaaccagagaccttgactgga
catgtccacttcaacaacctctccttctcctaccctacccgccaggaacgcaaagtactg
cagggcttctctctggagctgaggccgggtcagctgactgctctggtggggccgtcaggg
ggggggaagagcacctgtgtcagtctgctggagaggttctaccagcctcagcagggagag
atcctattggatggactgccactgcagagttaccagcaccactacctacacaggaagata
gccatggtaggccaggagcctgttctgttctctgggtccatcaaggacaacattgcctac
ggcctggcagactgctctctggagagggtacaggaagctgctcgcagagccaatgcccac
agcttcatcagccaactggagaagggttacgacacagatgtaggagagcggggaggtcag
ctgtccggcggtgagaagcagcgtatcgccatcgccagagctctgatcagagagccacag
gtcctcatcctggacgaggtcaccagcgcactggacacggagagcgaacacatggtccag
gaggccctggctagctgcccctcccagacgctgctggtgatcgctcacaggctgaagacc
attgagagggcggatcagatcattctgattgaccaggggaccgtccaggagcagggcact
caccaggagttgatggacaggaaggggagctactacaaactaaaagagagactcttcacc
gaagacgacgcgccacattga
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