KEGG   Salmo salar (Atlantic salmon): 100192336
Entry
100192336         CDS       T04363                                 
Symbol
irf7, IRF3
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04620  Toll-like receptor signaling pathway
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
sasa04623  Cytosolic DNA-sensing pathway
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100192336 (irf7)
   04621 NOD-like receptor signaling pathway
    100192336 (irf7)
   04622 RIG-I-like receptor signaling pathway
    100192336 (irf7)
   04623 Cytosolic DNA-sensing pathway
    100192336 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100192336 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    100192336 (irf7)
Transcription factors [BR:sasa03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    100192336 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 100192336
NCBI-ProteinID: NP_001130020
UniProt: B5X2E7
LinkDB
Position
ssa16:21187567..21198242
AA seq 415 aa
MQSCKPQFADWLIEQVRTEQYTGLFFMDNNKFRVPWKHNSRKDCSEDDRKIFRAWAVVSG
KITEHPNDKAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESPLIEEI
TLENYGIDHALTTTENTPPGMEHDILNFSNLTLNHLDLNQHTENYIPVHTHHPVPPVLIQ
QPYAQVNPDALLNLPATRSSLWDLEITISYRGSEMLKTQVSGPRVQLHYQCNALEPNTQP
LCFPSTDGLPDLKQIEYTNCILRSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSNPREAHP
EPRKMPQNEMVQLLNFQQYENELIAFKENRRGSPDYTIHMCFGEKFPDGKPPEKKLIVVK
VVPLICRYFHEVAQEEGASSLQNDISLQISHHNSLMELINATWPDGPQHTMGQYF
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgcaaagctgcaaacctcagttcgctgactggctgatagaacaagtgcggaccgagcaa
tacaccggtttgttctttatggacaacaataagttcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccgtaaaatattcagggcatgggcagtggtcagcggt
aaaatcactgagcatcccaatgacaaggcaaagtggaagactaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactccaaggactcaaacgacccc
cataaagtttacctggtcatcaatgagtataactatgagagccctctcatagaagaaatc
actctggagaactatggcattgaccatgctctcaccactacagaaaacacccccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccacctagacctgaaccaa
catacagagaattatataccggtacacacacaccacccagtgccaccagtcctaatacag
cagccatatgcccaagtaaacccggatgccctgctcaacctgcctgccacccgctcatct
ctctgggacttggagatcaccatctcctatagggggagcgagatgctaaagacccaggtg
tcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaacacccagccc
ctctgcttccccagcactgacgggctaccagacctcaaacagattgaatacaccaactgc
atcctaagaagcgtccaaaggggtcttctcctcgaggtacaaaacactggtatctatggt
taccggcaggacaagtgccacgtgttctccagtactagcaaccccagagaggcacaccct
gaacccaggaagatgccccaaaatgaaatggtacaactgttgaacttccagcagtacgaa
aatgagctgatagcgtttaaggagaacaggcgaggctcacctgactataccatccacatg
tgctttggtgagaagttccctgacggaaaacccccggagaagaaactcatcgtcgtcaag
gtggttcccctgatctgtcgttacttccacgaggtggcccaggaggagggggcgtcgtcc
ctccagaatgacatcagcctgcagatctcccaccacaacagcctgatggagctcatcaat
gccacctggcccgacggcccacagcacaccatggggcagtacttctag

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