Salmo salar (Atlantic salmon): 100192336
Help
Entry
100192336 CDS
T04363
Symbol
irf7, IRF3
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04620
Toll-like receptor signaling pathway
sasa04621
NOD-like receptor signaling pathway
sasa04622
RIG-I-like receptor signaling pathway
sasa04623
Cytosolic DNA-sensing pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100192336 (irf7)
04621 NOD-like receptor signaling pathway
100192336 (irf7)
04622 RIG-I-like receptor signaling pathway
100192336 (irf7)
04623 Cytosolic DNA-sensing pathway
100192336 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100192336 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100192336 (irf7)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100192336 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100192336
NCBI-ProteinID:
NP_001130020
UniProt:
B5X2E7
LinkDB
All DBs
Position
ssa16:21187567..21198242
Genome browser
AA seq
415 aa
AA seq
DB search
MQSCKPQFADWLIEQVRTEQYTGLFFMDNNKFRVPWKHNSRKDCSEDDRKIFRAWAVVSG
KITEHPNDKAKWKTNFRSALNSLCRRFKMVEDHSKDSNDPHKVYLVINEYNYESPLIEEI
TLENYGIDHALTTTENTPPGMEHDILNFSNLTLNHLDLNQHTENYIPVHTHHPVPPVLIQ
QPYAQVNPDALLNLPATRSSLWDLEITISYRGSEMLKTQVSGPRVQLHYQCNALEPNTQP
LCFPSTDGLPDLKQIEYTNCILRSVQRGLLLEVQNTGIYGYRQDKCHVFSSTSNPREAHP
EPRKMPQNEMVQLLNFQQYENELIAFKENRRGSPDYTIHMCFGEKFPDGKPPEKKLIVVK
VVPLICRYFHEVAQEEGASSLQNDISLQISHHNSLMELINATWPDGPQHTMGQYF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctgcaaacctcagttcgctgactggctgatagaacaagtgcggaccgagcaa
tacaccggtttgttctttatggacaacaataagttcagagtcccgtggaaacacaattct
aggaaggattgctccgaggacgaccgtaaaatattcagggcatgggcagtggtcagcggt
aaaatcactgagcatcccaatgacaaggcaaagtggaagactaacttccgctctgcactg
aacagcctgtgcaggcgtttcaagatggtggaagaccactccaaggactcaaacgacccc
cataaagtttacctggtcatcaatgagtataactatgagagccctctcatagaagaaatc
actctggagaactatggcattgaccatgctctcaccactacagaaaacacccccccaggc
atggagcatgatatactgaactttagcaacctaaccttgaaccacctagacctgaaccaa
catacagagaattatataccggtacacacacaccacccagtgccaccagtcctaatacag
cagccatatgcccaagtaaacccggatgccctgctcaacctgcctgccacccgctcatct
ctctgggacttggagatcaccatctcctatagggggagcgagatgctaaagacccaggtg
tcaggccccagggttcagctccactaccagtgtaatgctctcgagcccaacacccagccc
ctctgcttccccagcactgacgggctaccagacctcaaacagattgaatacaccaactgc
atcctaagaagcgtccaaaggggtcttctcctcgaggtacaaaacactggtatctatggt
taccggcaggacaagtgccacgtgttctccagtactagcaaccccagagaggcacaccct
gaacccaggaagatgccccaaaatgaaatggtacaactgttgaacttccagcagtacgaa
aatgagctgatagcgtttaaggagaacaggcgaggctcacctgactataccatccacatg
tgctttggtgagaagttccctgacggaaaacccccggagaagaaactcatcgtcgtcaag
gtggttcccctgatctgtcgttacttccacgaggtggcccaggaggagggggcgtcgtcc
ctccagaatgacatcagcctgcagatctcccaccacaacagcctgatggagctcatcaat
gccacctggcccgacggcccacagcacaccatggggcagtacttctag
DBGET
integrated database retrieval system