Salmo salar (Atlantic salmon): 100194542
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Entry
100194542 CDS
T04363
Symbol
six1
Name
(RefSeq) SIX homeobox 1
KO
K15614
homeobox protein SIX1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100194542 (six1)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100194542 (six1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
100194542
NCBI-ProteinID:
NP_001133100
UniProt:
B5DG16
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Position
ssa09:complement(24949211..24951236)
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AA seq
284 aa
AA seq
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MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNSGNNKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSLLLLQGNMSH
PGVSSYPMTGLGGAQPLHGMHGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatactaccttcgtttgggtttacccaggagcaagtcgcctgcgtctgcgaggtc
ctgcaacaaggagggaacctggagaggctcggtcgttttctctggtctctcccagcgtgt
gaccacctccacaagaatgaaagtgtactgaaagcaaaggcggtggtcgccttccaccga
gggaacttcagagagctatataagatcctggagagccaccagttttccccgcacaaccat
cccaagctgcagcagctgtggctgaaagcgcactacgtggaggcggaaaaattgcgcggc
cgaccgcttggagccgtggggaagtatagggtccgcaggaaattccctctgccccgcacg
atctgggacggcgaggagaccagttattgctttaaggagaaatcaaggggtgttctgaga
gagtggtacacgcataacccctatccctccccgcgagagaaaagggagctggccgaggcc
acgggactgaccactacgcaggtcagcaattggttcaaaaacagacgccagagagacaga
gccgcagaagctaaagaaagagagaacagcgaaaacaataactccggcaacaacaaacag
aaccagctgtctcccctcgacggcggcaagtcgctcatgtccagctcggaagatgagttc
tctccaccacaaagccctgatcagaactctttgcttttgctccagggaaatatgagtcac
cccggcgtctcctcttaccctatgaccggcctcggtggcgcacagccgctgcatggaatg
cacggacacccgcaccaactccaagactcgttgctgggacctctaacatcgagccttgtg
gatctaggctcctaa
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