KEGG   Salmo salar (Atlantic salmon): 100194581
Entry
100194581         CDS       T04363                                 
Symbol
vps28
Name
(RefSeq) VPS28, ESCRT-I subunit
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100194581 (vps28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    100194581 (vps28)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    100194581 (vps28)
Membrane trafficking [BR:sasa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    100194581 (vps28)
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100194581 (vps28)
  Exosomal proteins of other body fluids (saliva and urine)
   100194581 (vps28)
  Exosomal proteins of colorectal cancer cells
   100194581 (vps28)
  Exosomal proteins of bladder cancer cells
   100194581 (vps28)
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 100194581
NCBI-ProteinID: NP_001133139
UniProt: B5DG99
LinkDB
Position
ssa14:78615298..78620472
AA seq 223 aa
MFHGIPVTGGMGGAPANKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtttcacggaatacctgtcacgggaggtatgggaggagctcctgccaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgcaagagaacgagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacacttcaggccctggagaaagcttacatcaaagac
tgtgtgacccctaatgagtacacggctgcttgctccaggctgctggtgcaatacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgatgacttctgcaggaagtac
agacttgactgcccgctagctatggaaagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgcagatatcgtatcgctctttatcactgtg
atggacaagctacgtctggagatccgggccatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcagcctctggttgaccactctcagcagcatgtcagcctctgatgagctggacgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaatgccttcaaccgcttctta
cactcctcctaa

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