KEGG   Salmo salar (Atlantic salmon): 100194654
Entry
100194654         CDS       T04363                                 
Symbol
UBIQ, Ubiquitin
Name
(RefSeq) ribosomal protein S27-3
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03010  Ribosome
sasa04120  Ubiquitin mediated proteolysis
sasa04137  Mitophagy - animal
sasa04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    100194654 (UBIQ)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100194654 (UBIQ)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100194654 (UBIQ)
   04137 Mitophagy - animal
    100194654 (UBIQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sasa03011]
    100194654 (UBIQ)
   04121 Ubiquitin system [BR:sasa04121]
    100194654 (UBIQ)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sasa04147]
    100194654 (UBIQ)
Ribosome [BR:sasa03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    100194654 (UBIQ)
  Archaea
    100194654 (UBIQ)
Ubiquitin system [BR:sasa04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   100194654 (UBIQ)
Exosome [BR:sasa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100194654 (UBIQ)
  Exosomal proteins of colorectal cancer cells
   100194654 (UBIQ)
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N IBR DUF2604 Ubiquitin_5 TBK1_ULD OTU1_UBXL
Other DBs
NCBI-GeneID: 100194654
NCBI-ProteinID: NP_001133210
UniProt: B5XF34
LinkDB
Position
ssa01:complement(68777053..68779433)
AA seq 156 aa
MQIFVKTLTGKAITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKGKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRE
CPAEECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagattttcgtcaaaaccctcacggggaaggctataaccctcgaggttgagccttca
gacaccattgaaaatgtcaaggccaaaatccaagacaaagaaggtatccctcccgatcag
cagaggttgatcttcgctggtaagcagctggaggatggacgcacactgtccgactacaac
attcagaaggagtccactctgcatttggtgctgagactgcgtgggggtgccaagaagggg
aagaagaagtcctacaccactcccaaaaagaacaagcacaagaggaagaaggtcaagctc
gcagtgctcaagtactacaaggttgatgaaaacggcaagatccaccgtctgcgtcgtgag
tgtccagctgaagagtgtggcgctggtgtgttcatggccagccacttcgataggcactac
tgtggcaagtgctgcctcacttactgcttcaacaagcctgaggacaagtaa

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