Salmo salar (Atlantic salmon): 100194746
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Entry
100194746 CDS
T04363
Symbol
atg4b
Name
(RefSeq) ATG4 autophagy related 4 homolog B (S. cerevisiae)
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04136
Autophagy - other
sasa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100194746 (atg4b)
04136 Autophagy - other
100194746 (atg4b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
100194746 (atg4b)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100194746 (atg4b)
03029 Mitochondrial biogenesis [BR:
sasa03029
]
100194746 (atg4b)
Peptidases and inhibitors [BR:
sasa01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
100194746 (atg4b)
Membrane trafficking [BR:
sasa04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100194746 (atg4b)
Mitochondrial biogenesis [BR:
sasa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100194746 (atg4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
100194746
NCBI-ProteinID:
NP_001133247
UniProt:
B5X0R5
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All DBs
Position
ssa10:51359040..51365291
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AA seq
397 aa
AA seq
DB search
MDAATLTYDTLGFGEFDDFPETSEPVWILGKEFNALTEKEDILSHVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVRRHLGRDWRWVRSQSQREDYISILNAFLDKKD
GYYSLHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDSWSRLTVHVAMDNTVVIEEIK
RLCMPWLDYGGAACVDLQGGMPEPNGCLEGACALAEEETALWKPLLLLIPLRLGLSDINE
AYIETLKQCFQLPQSLGVIGGKPNHAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDD
TYHCQHPPCRMHICEIDPSIAVGFFCRTEDDFDDWCMRFRKLSHTRAGLPMFELVDCQPS
HFACSVDVLNLNPDFSDSDRLERFFDSEDEEFEILSL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacatacgacacacttggctttggagagtttgacgattttcca
gagacctcagagccagtgtggatcttggggaaagaattcaatgcactcacagaaaaggaa
gacattctttcacatgtcacttcacgactatggttcacctacagaaaaaacttcccaccc
attggagggacagggcctacgtccgacacaggctggggctgcatgctgcgatgtggacag
atgatcctaggcgaggccctggtccgcaggcatctaggccgagactggagatgggtgagg
agccagtctcagagagaagactacatcagtatcctcaacgccttccttgacaagaaagat
ggctactattctttacatcaaatcgcccagatgggagtcggagaggggaagtctataggc
cagtggtacggaccaaacacagtggcacaggtactgaagaaactagctgtgtttgactcg
tggagtcgcctgactgtacacgttgctatggacaacactgtggtgatcgaagagatcaag
cggttgtgtatgccctggctggactatggtggagcagcgtgtgtggatctccaggggggt
atgccagagcctaacggctgcctggagggggcctgtgccctggctgaggaagagaccgct
ctctggaagcccctgctcctcctcattcctctcaggctgggcctaagcgatatcaatgag
gcctacatcgagaccctgaagcagtgcttccagctgccccagtccctgggtgtcatcgga
gggaaacccaaccatgctcattacttcataggctatgttggagaggagctgatctacctg
gacccccacactacccagcctgcagtagagccctgtgaggacagccaggtccctgacgac
acttaccactgtcagcacccgccatgccgcatgcacatctgtgaaatagacccctccatc
gcagtgggtttcttctgcagaacggaggacgactttgatgactggtgtatgcgcttccga
aagttgtcccacactagagcaggtctgcccatgtttgaactggtagactgtcaaccatct
cacttcgcctgttctgtagacgttctcaacctcaatcctgatttctcagactctgatagg
ttggaacggttctttgattctgaggatgaagaatttgaaattctgtccctgtga
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integrated database retrieval system
