Salmo salar (Atlantic salmon): 100194782
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Entry
100194782 CDS
T04363
Symbol
abcf2
Name
(RefSeq) ATP-binding cassette, sub-family F (GCN20), member 2
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
100194782 (abcf2)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100194782 (abcf2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_22
AAA_24
AAA_14
NACHT
VapE-like_dom
AAA_33
AAA_23
XRCC4_CC
Dynamin_N
Hac8_like_N
Motif
Other DBs
NCBI-GeneID:
100194782
NCBI-ProteinID:
NP_001133283
UniProt:
B5X0Y6
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Position
ssa03:complement(6293360..6305698)
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AA seq
611 aa
AA seq
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MPSDLAKKKAQKKKEAAKSRQKAKKPGEDGEGEKPDQGQQNGAESNGVDILTKEMDEFEL
KKTEARAVTGVLASHPNSTDVHVASLSLTFHGQELLQDTSLELNSGRRYGLIGLNGTGKS
MLLSAIGHREIPIPEHIDIYHLTREMAPSDKTALQCVMEVDEERIHLEKEAERLASEDSE
CEKLMELYERLEELDADKAEVRASQILHGLGFTAAMQQKKLKDFSGGWRMRVALARALFL
KPFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIMHLHERKLKY
YTGNYDQYIKTREELEENQMKRFNWEQDQIKHMKNYIARFGHGSAKLARQAQSKEKTLQK
MVASGLTESVSNDKTLSFCFPPCGKIPPPVIMVQNVSFKYSDDQPHIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLTGELLPTDGMIRKNSHVKIGRYHQHLTEQLELDLSPLDYMMK
CYPEIKEREEMRKIIGRYGLTGKQQVNPIRNLSDGQKCRVCFAWLAGQNAHMLFLDEPTN
HLDIETIDALADAINEYEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKHHL
KKKIDKNSHGV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgacctggccaagaagaaggcgcagaagaagaaggaagccgccaaatcccga
cagaaggccaaaaaaccaggagaggacggagagggagagaaaccagatcaaggccagcag
aatggagcagaaagcaacggagtggatatcctgaccaaggagatggacgagtttgagctg
aagaaaactgaggcgcgggcggtgaccggcgtgctggcgtcgcacccaaacagcacggac
gtccacgtcgccagcttgtcgctcaccttccacgggcaggagctgctgcaggacaccagc
ctggagctcaactcgggccgtcgctatggcctcattggcctcaacggcactggtaaatcc
atgttgctgtcagccattggccaccgcgagatacctatcccagagcacattgacatttac
cacctgacccgtgagatggcgcccagcgacaagacggccctgcagtgtgtcatggaggtg
gacgaggagaggatccatctggagaaggaggcagagcgcctggcctccgaggactctgag
tgtgagaagctgatggagctgtacgagcgtctggaggagctggacgcagacaaggccgag
gtacgggcctcccagatcctccacggcctgggctttaccgccgccatgcagcagaagaag
cttaaggacttcagcggaggctggaggatgcgtgtcgctctggccagagctctgttcttg
aagcccttcatgttgctgctggatgagcccaccaaccatctggacctggatgcctgtgtg
tggctggaggaggagcttagccaatttaaacgtattttggtcctgatttcccattcgcaa
gacttccttaacggcgtgtgcaccaacatcatgcacttacacgagcgcaagctgaaatac
tacacgggcaactacgaccagtacataaagaccagggaggagctggaagagaaccagatg
aagagattcaactgggagcaggaccagatcaaacacatgaagaactacatagcccggttt
gggcacggctcagccaagcttgctcgccaagcccagagtaaagagaaaaccctgcagaag
atggtggcctctggcctgactgagagtgtttctaatgacaaaaccctgtcattttgtttt
cctccctgtgggaagattccccctccggtcatcatggtacagaatgtcagcttcaagtac
tctgatgaccagccccatatatacaagaaccttgagtttggcatagacctcgacacccga
gtggcccttgtggggcccaacggggccgggaagtccaccctgctcaaacttctcactgga
gagctcctccctactgacggtatgattcgcaagaactcccacgtcaagattggcagatat
caccagcatcttacagagcagctggaactcgacctctcgcccctggattacatgatgaag
tgttacccagagatcaaggagagggaggagatgaggaagatcattggccgctatgggctg
acaggcaaacagcaggtgaaccccatcagaaacctatctgatgggcagaagtgccgggtg
tgctttgcctggctggctggtcagaatgcccacatgctcttcctggatgagcccaccaat
cacttggacatcgagaccattgacgccctggccgacgccatcaacgagtacgagggcggc
atgatgttggttagccacgacttcaggctcatccagcaggtggcccaggagatctgggtt
tgtgaaaagcagaccatcaccaaatggaaccgggacatcttggcttacaaacaccatctg
aaaaagaagattgacaaaaattcgcatggcgtataa
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