Salmo salar (Atlantic salmon): 100194851
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Entry
100194851 CDS
T04363
Symbol
rgp1
Name
(RefSeq) RGP1 retrograde golgi transport homolog (S. cerevisiae)
KO
K14319
Ran GTPase-activating protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100194851 (rgp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100194851 (rgp1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100194851 (rgp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
100194851
NCBI-ProteinID:
NP_001133352
UniProt:
B5X198
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All DBs
Position
ssa03:65578476..65583617
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AA seq
573 aa
AA seq
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MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALKSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGVGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRRVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDDLREVMDGLNMGDLLGSLSDD
EGEPEEDDEEDDDDEEDDDDYEEDDYEEDDDVEEEEDSGVNQVSSPPSVPRPPDAASFLC
FPSPDKLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDEDVKSAVLDSIDAIL
RKAFASPSFQGYNFVSSLLVMLGLLKSEDKVKPVHVVPGHLQALEYVVRQDYFPQDHIAV
LEAFMSRHVQALESCSSARNILKSTLEHVRPEN
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggcaaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaagggtttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aaatccctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcgttggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccacccaggggtgactgctctggccactgccatgcaacacaacccccagctccgcgtc
ctcaacctcaacgacaacaccttcaccaagaaaggagcaatcgccatggcacaggctctg
aaacatttgcgcagagtccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcagttactgaggggcttcccatcctcaaggagctgaatctg
tcatttggggagatcactggagaagctgcactgctggtggcacaatcagtcgagggcaaa
gccacactggagaaactggacttaaatggtaactgcctgggggaggagggctgtgatgat
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgatgat
gaaggggagccagaggaggatgatgaggaggatgacgacgatgaggaggatgacgatgac
tatgaggaggatgactatgaggaggatgatgatgtggaggaagaagaggacagcggtgtg
aatcaggtttcctcccctccgtcagtgccccgacccccagatgccgcctcgttcctctgc
ttcccctcccctgataagctgctcaaactgggcaccaagagggccctgctctttgaacag
caggtagatgtggctgatgctggtaagacagcggaggctttcctgaaaatctcctctgtg
tacaatgaggaagatgaagatgttaagagtgctgtcctagacagtattgatgcgattctc
aggaaagcctttgcaagcccctccttccaaggttacaactttgtatcatcgctgttagta
atgctgggactcctcaagagtgaggacaaggtgaagccggtacatgtggtgcctggtcat
ttgcaggccctggagtacgttgtgcgccaggactacttcccccaggaccacatcgctgtg
ctggaggctttcatgtccagacacgtccaggccctggagtcgtgcagcagcgccaggaac
atcctcaagtccacgctggagcatgtcaggcctgagaactga
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