Salmo salar (Atlantic salmon): 100194936
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Entry
100194936 CDS
T04363
Symbol
ccd98, abra1, ccdc98, fam175a
Name
(RefSeq) Coiled-coil domain-containing protein 98
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100194936 (ccd98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100194936 (ccd98)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100194936 (ccd98)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
DUF3461
DUF1090
JAB
GrpE
Motif
Other DBs
NCBI-GeneID:
100194936
NCBI-ProteinID:
NP_001133437
UniProt:
B5X1P9
A0A1S2WZQ2
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Position
ssa13:89381814..89386148
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AA seq
404 aa
AA seq
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MEDSNSYIRVSGFVLGSLMFQHLNSDSDVEGLILGETKAEERSNITDSQIDNIQFEHTIN
IQKHISCRKLNSFYNRIGEVNRDEIRHILSNYKEENVIGWYKQRRNTDQQITFREQVVHE
NLKRALSNHELIFLLLTPSEITTSGSTHKLEYAVYRSHGSQYCSVPVLVSNLGLLEEQDY
WRLSASCSSVNYNHAVRKHRSKFFSSDGSLHEVDEINDMNNSLQGELKMACKKVEESERL
VEKLLADVSDLRRMVNERKQELREISADGASTPAQPRENVLLCEVIKTLFPGASLLQTQA
LNFQGFPLPEFCCSTDHGIDIATTLPLILSHTLPKARKGRLGRGGGTSWRKCPLRESSEV
PKRRKGMLEETDETLSVSGSETEEDLIPANRNGNNLDVSNSPVF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcaaactcttatattcgcgtctctggatttgttcttggttcattgatgttt
cagcacttgaacagtgactctgatgtggaaggtctcattctcggggagaccaaagctgaa
gagcgaagcaacatcactgactctcaaatcgacaacatacagtttgagcatacaataaac
attcagaaacacatatcatgtcgcaagctcaatagcttctataatagaataggggaggtg
aaccgggatgaaataaggcacattttatccaactataaggaggagaatgtgattggttgg
tataaacagcggagaaacacagatcaacaaattaccttcagagagcaagtagtccacgag
aacctgaagagggcactctccaatcatgagctgatctttctgctactgacacccagtgag
atcacaacatcaggctccactcacaaactggagtatgcagtctacagatcacatggcagt
cagtattgcagtgttcctgtcctggtcagcaacctgggtttgttggaagagcaggactac
tggagactctctgcatcttgttcatcagtcaactacaaccatgctgttaggaaacacaga
tctaaattcttctcctccgatggatctctgcatgaggtggatgagattaatgacatgaac
aactccttgcagggtgaactgaagatggcatgtaagaaagtggaggagagtgaacgattg
gttgagaagctgcttgcagacgtttctgatctaagaaggatggtcaatgagaggaaacaa
gagctgagagaaatctcagcagatggagcctccaccccggcacagccccgggagaatgtg
ctgctctgcgaggtcatcaaaacactatttcctggggcatctctactccaaacgcaggct
ctaaacttccaggggtttccattgcccgagttctgctgcagcactgaccatggcatagac
attgccacaacactgcctttgatcctgagtcatacactccctaaagccaggaaggggagg
cttgggagaggcggaggtacatcctggagaaaatgtccccttcgtgaatcatctgaggtg
cccaagaggaggaaaggcatgctggaggagactgatgagactttgtcagtcagtgggtca
gagaccgaggaggatttgatcccagccaatcggaacggaaataatttagatgtgtccaac
tccccggttttctga
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