Salmo salar (Atlantic salmon): 100194953
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Entry
100194953 CDS
T04363
Symbol
irf4
Name
(RefSeq) Interferon regulatory factor 4
KO
K09445
interferon regulatory factor 4
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
100194953 (irf4)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
100194953 (irf4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
100194953
NCBI-ProteinID:
NP_001133454
UniProt:
B5X1T3
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Position
ssa23:12509053..12514928
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AA seq
468 aa
AA seq
DB search
MNPESDYGMSTVSCGNGKLRSWLIEQVDTGKYPGLVWENEEKSIFRIPWKHAGKQDYNRD
EDAALFKAWALFKGKFREGIDKPDPPTWKTRLRCALNKSNDFEELVQRSQLDISDPYKVY
RIIPECAKKHFLLSGSKQEDGGSPLSPLSYPMLPSYPALQTQMSGYMPTTERGWMKDYLP
EQASLPELPYAQCPYPSRSLSWAQGPSMDNGYQITGSFYTYSATDAQPSPFTLDTSMRSA
EALSDMRLHVSVFYRDSLWREVTTSSPEGCRIAPCSPDDKLYSPTVGPDLVPLPLDSLQA
LGRGEECPPSPPGCTLERGVLLWMAPDGLYARRLCQERVFWEGGLSSYADKPNKLEREHT
CKLLHTQDYLTELQGYALHCRPPPRLQVLLSFGDECLDPQRQRTLTVQVEPMFARQLLYY
TQHQQTSGHYYRSYDIPLPGVTEHSMTPSVTEDYQRVITHHHSNTLQD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgaatcggactacgggatgtctacggtgagctgtgggaacggaaagctccgc
tcgtggctaatcgaacaggtggataccgggaagtacccgggcctggtgtgggagaacgaa
gaaaagagcatcttcaggataccatggaagcacgcgggcaagcaggactacaaccgggac
gaggatgccgctctcttcaaggcttgggcgctgtttaaaggcaagtttcgggagggcatc
gacaaaccggacccgccaacgtggaagacgcgcctccggtgcgcgctcaacaaaagtaac
gacttcgaggagctcgtgcagcgaagtcagctggacatctcagacccttacaaagtctac
cggatcatcccggagtgcgccaagaagcatttcttgctatcaggatccaaacaggaggat
ggtggcagccccctgagtcctctgagttaccccatgctgccctcataccccgccctgcag
acacagatgtctgggtacatgcccactacagagagaggctggatgaaggactatcttcca
gagcaggcctctcttcctgagctgccctatgcccagtgcccctacccctcacgcagccta
tcctgggcccaggggcccagcatggacaacgggtaccagatcacagggtccttctacacc
tacagcgctactgacgcccagccatcccccttcacactggacaccagcatgaggtcagca
gaggcactctcagatatgcggttacatgtgtcagtgttttaccgggactctctgtggagg
gaggtgaccacctccagtccagagggctgtcgcatcgctccctgctccccagacgacaag
ctttattcccccactgtgggtccagacctggtacccctacccctggacagcctccaagcc
ctggggaggggggaggagtgtcctcccagcccccctggttgtaccctggagaggggcgtg
ctactgtggatggccccagatggcctctatgcccggcggctgtgccaggagagagtgttc
tgggaaggagggttatcatcctatgcagacaaacccaacaagctggagagagaacacacc
tgtaaactactgcacacacaggactacctcacagagttgcagggctatgccctccactgt
cggccccctccacgtctccaggtgctgctgagcttcggagacgagtgtctggatccccag
agacagaggaccctcactgtacaggtggaacccatgtttgccaggcagctcctgtactac
acccagcaccagcagaccagcggacactactaccgcagctacgacatccctctccctggg
gtcacggaacacagcatgaccccttccgtaactgaggactaccagagggtcatcacacat
caccatagcaacaccctgcaggactga
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