Salmo salar (Atlantic salmon): 100194999
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Entry
100194999 CDS
T04363
Symbol
paf1
Name
(RefSeq) paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
KO
K15174
RNA polymerase II-associated factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100194999 (paf1)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
100194999 (paf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
100194999
NCBI-ProteinID:
NP_001133500
UniProt:
B5X225
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Position
ssa09:115067709..115072925
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AA seq
532 aa
AA seq
DB search
MAPTIQTQAQRDSDGHRSSSHRTVPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQHRFV
QYKATSLEKQHKHELLTEPDLGVTIDLINPDTYRVDPSILLDPADEKLLEEDITAPSSSK
RSQQHAKVVPWMRKTEYISTEFNRYGVSNEKVEVKIGVSVKQQFTEEEIYKDRDSQIAAI
EKTFEDAQKPIAQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDMSAPQGVE
MMSQAMIRGMMDEEGNQFVAYFLPNEETIRKRKRDVDEELDYMPDDLYDYKIAREYNWNV
KNKASKGYEENYFFIFRDGDGVYYNELETRVRLSKRRAKAGAQSTTNAVLVCKHRDMNDK
ELEAQDARKAQLENHEPEDEEEDMDLGKLQDSGDEKGSESEGDNSDSDSDREDEDGKRSG
AEDDEEGVKRRRKASGSGSESGEEEVKLADEVEIFGSDDDSDDDDNEPKNGAARSSGEEG
SGSEKESHRERSRSGSASPAHSSGSDHSEGGRAQSGSGSEQASDSSDGSDSE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggctccaactatccagacacaagcacagcgagactcagacggtcacaggagttcatca
cacagaactgttccagagaggtctggagtggtctgtcgggtaaagtactgcaacagcctg
cctgacatcccatttgatcccaaattcatcacatatccatttgaccagcacaggtttgtg
cagtacaaggctacgtcgttagagaagcaacacaaacatgaactgcttactgagcctgac
cttggtgtcaccatcgacctcattaacccagacacctaccgcgtcgaccccagcattctt
cttgatccagctgatgagaagttattggaagaagacatcacagctccatccagctcgaaa
agatctcagcagcacgccaaggtagtcccgtggatgaggaagactgagtacatctctaca
gagttcaacagatatggtgtctccaatgagaaagtggaagtcaagatcggtgtgtctgtg
aaacagcagttcacagaggaggagatatacaaggatagggacagccagattgctgcaatt
gaaaagacctttgaggatgcacagaaaccgattgcccagcactacagtaaacccagagtc
actcctgtggaggtgatgcctgtgttccctgacttcaagatgtggatcaacccgtgtgct
caggtaatcttcgactctgatcctgctcctaaagacatgtcagcaccccagggtgtggag
atgatgtcacaggccatgattagaggtatgatggatgaggaaggaaaccagtttgtggcc
tacttcctgcccaatgaggaaactattcgcaagcgcaagagagatgtggatgaggagctg
gactacatgcctgatgatctgtatgactataagatagccagggagtacaactggaacgtg
aagaacaaagccagcaagggctacgaggagaactacttctttatcttcagagacggagat
ggagtctactacaacgagctggagaccagagtgcggctgagtaagaggagagctaaggct
ggagcccagtctactacaaacgctgtgctggtgtgtaagcacagagacatgaatgacaag
gagctggaagcacaggatgcgcgtaaggctcagctggagaaccatgaaccagaggacgaa
gaagaggacatggacttgggtaaactgcaggactctggtgatgagaagggcagcgagagt
gagggagacaactctgacagtgactctgacagggaggatgaggatggaaagcggagtgga
gctgaggatgatgaagagggagttaagcggaggaggaaggccagtggtagtggcagtgag
agtggcgaggaggaggtcaagctggcggatgaggtggaaatcttcggtagcgacgacgac
agtgatgacgacgacaacgagcccaagaatggagcagcccggagcagtggggaggagggc
agtgggagtgagaaggagagccatagggagaggagtaggagtggcagcgcgtctccggcc
cacagtagcgggagtgaccactcagagggtggccgtgcccagagcgggagtggcagtgaa
caggcctcagactccagcgacggcagtgacagtgaataa
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