Salmo salar (Atlantic salmon): 100195003
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Entry
100195003 CDS
T04363
Symbol
ptbp2
Name
(RefSeq) polypyrimidine tract binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100195003 (ptbp2)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100195003 (ptbp2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
100195003
NCBI-ProteinID:
NP_001133504
UniProt:
B5X232
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All DBs
Position
ssa19:14311462..14330742
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AA seq
520 aa
AA seq
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MDGIGDVAVGVKRGSDELLSSSLYNSGSDMSSISDGTSNGSDSKKLRVEDRMEAPPSRVL
HIRKLPNETSETEVIALGLPFGKVTNILTLKGKNQAFLELGTEEAAITMVNYYSTVTPHV
RNVPVFIQYSNHKELKTDAGNQRAQAVLQAVSAVQGGGTPTSGSDLALTAASSPVLRIII
DNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPSTAQQAKIALDGQNIYN
SCCTLRIDYSKLVNLNVKYNNDKSRDYTRPELPAGDGQPAMDPNMAAAFQGKDSNSLLGA
LSPLNAAAAAAAAAGRVALSGHSGSSGVLLASNLNEEMVTPQSLFTLFGVYGDTQRVKIL
YNKKDSALIQMADASQAQLAMSHLNGQKMYGKVIRVALSKHTSVQLPRDGLDDQGLTKDF
TNSPLHRFKKPGSKNFQNIFPPSTTLHLSNIPTDVTEEDLRLLFSNAGGTVNAFKFFQDH
KMALLQMSTVEEAIQGLIDLHNYNMGDNHHLRVSFSKSSI
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacggtattggagatgttgcagttggcgtaaagagaggatcagatgagctgctgtca
agcagtctctacaacagtggctctgacatgagcagtatcagtgatggtacgtccaacggg
agtgacagtaaaaaactgagagtggaagacaggatggaggctcctccttctcgtgtgttg
cacatcagaaaactgcccaacgaaacttcagaaacggaggtcattgccctggggttacct
ttcgggaaggtcaccaatatcctgactctgaagggaaaaaaccaggctttcttggagctg
gggacagaggaagcggcaattactatggtcaactactactctactgtgacaccgcatgtt
cgtaacgtccccgtattcatccagtactccaaccacaaagaactcaaaacagacgccgga
aaccagcgtgcccaggcggtcttgcaggcggtgtcagcggtccaaggaggcggtacccct
acatcgggttcagatctggctctaacagctgcatccagccctgtgctcagaataatcatc
gacaacatgttctacccagtcactctggatgtgctgcagcagatcttctcaaagttcggc
acggtcatgaagataatcacattcaccaagaacaatcagttccaggccctgctgcagttc
aacgacccatctaccgcacagcaagccaaaattgccctggatggtcagaacatctacaac
tcgtgctgtacgctccgcatcgattactccaagctggtcaacctgaacgtcaagtacaac
aacgacaagagccgtgactacacccggccagagctccccgccggggatggacagcctgcc
atggaccccaacatggctgctgcctttcaaggcaaggactccaactctctgcttggtgcc
ctgagcccgctaaatgctgcggcggcggcggctgctgctgcagggagggtggctctgtct
ggtcactcgggctccagcggcgtgctcctggcctccaacctcaatgaagagatggttacg
ccccaaagtctgtttactctcttcggggtctatggggacacccagagggtgaagattctt
tacaataagaaggacagtgctctgatacagatggccgatgccagtcaagcccagctagcg
atgagtcacctgaatggtcagaagatgtatgggaaggtcatcagggtggctctgtccaag
catacctcagtgcagctgcccagggatggactggatgaccagggccttaccaaggacttc
accaactcccccctgcaccgcttcaagaagcccggctccaagaactttcagaacatcttc
cctccctccaccaccctccacctctccaacatcccaacggatgtaactgaagaagacctg
agactactgttctccaacgccgggggcactgtgaacgcattcaagtttttccaggatcac
aaaatggcgctgctccagatgtcgacggtggaagaggccatccagggtctgattgacctc
cacaactacaacatgggtgacaaccaccacctgagagtgtccttctccaaatcctccatc
taa
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