Salmo salar (Atlantic salmon): 100195130
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Entry
100195130 CDS
T04363
Symbol
erf3b
Name
(RefSeq) Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
KO
K03267
peptide chain release factor subunit 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100195130 (erf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100195130 (erf3b)
03012 Translation factors [BR:
sasa03012
]
100195130 (erf3b)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100195130 (erf3b)
Translation factors [BR:
sasa03012
]
Eukaryotic type
Release factors
100195130 (erf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
100195130
NCBI-ProteinID:
NP_001133631
UniProt:
B5X2S5
LinkDB
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Position
ssa06:21329780..21344974
Genome browser
AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEVPVDGKLDNEFAALNVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGADIEPVVATMEVAETAAPVENGDSEMTTEETWDLKGVEPNEEEPGGGPGGDGGPIV
VEEILEEEVLEEEEDVPIMPKVVALPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRASDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcctgggaacaagaggatgatgttgaggtcccg
gtcgacgggaaactcgataacgaattcgccgccctcaacgtgaatgccaaaccgtttgtc
cccaacataaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgcggacattgaaccagttgttgccaccatggaggtcgcagaaactgca
gccccggtggagaacggcgactctgaaatgaccacagaggagacgtgggacctgaaaggg
gtggagcccaatgaggaagaaccaggaggagggcctggtggcgacgggggaccaatagtt
gttgaggagattctggaggaggaagtcctggaggaggaggaagatgtgccaatcatgcct
aaagtggtagccctcccaccagacgcgcccaagaaggaacatgtgaatgtggtgttcatc
ggtcatgttgatgctggcaagtctaccatcggaggacaaatcatgtatttaacgggcatg
gtggagaagagaactctggagaagtatgaaagagaagccaaggagaagaacagggaaacc
tggtacctctcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggacgcgcca
ggccacaaaagctttgtgcccaatatgatcggaggagcgtcgcaagctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacgggctttgagaagggtggacagaca
cgggagcatgccatgttggccaaaacggcgggggtgaagcatctgatcatcctcgtcaac
aaaatggacgaccccacagtgaactggagcctagagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttgaagaaggttggcttcaaccccaagaaagacattcacttcatgccc
tgctccggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacttggtatacg
gggttaccattcattccacatctggacagtttgccaaacttaaacagagcgagcgacgga
ccagtcagattacccattgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcagggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcctgctgagtgatgacgtggagacagatgatgcttctcctggagag
aacctgaagctgagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgagaacctctgccactctggacgcacctttgacgcccagattgtcatcatt
gaacacaagtccattatctgccctggttacaatgctgtcctccacatccacacctgcatc
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcactgcc
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgttgaagcttgttgctgagagggactga
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