Salmo salar (Atlantic salmon): 100195139
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Entry
100195139 CDS
T04363
Symbol
hnrpm
Name
(RefSeq) Heterogeneous nuclear ribonucleoprotein M
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100195139 (hnrpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100195139 (hnrpm)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
hnRNP proteins
100195139 (hnrpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_MARF1
HnRNP_M_NLS
RBD_DEAH11
RRM_5
DUF7552
Motif
Other DBs
NCBI-GeneID:
100195139
NCBI-ProteinID:
NP_001133640
UniProt:
B5X2U1
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All DBs
Position
ssa10:complement(17601509..17621897)
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AA seq
668 aa
AA seq
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MSTEAAATEKPGQGEMNGKAKHEPNTRKERPQKRGGGRFEPYGNPSKRYRVFVSNIPYDV
KWQALKDLMKEKVGEVTYVEHLMDGEGKSRGCAIVEFRTEELMKKAVEKVNKHNLNGRPL
KVKEDPDGVIAQRDLHRAQGGGGGGPPGGHGGMNMGMGMDRMNMERMNMDCMGPGPGGPP
MVNIPPSLMNNSNIPNEIIHGLQAGKIGSTVFVANLDYKVGWKKLKEVFGMAGVVVRTDI
LEDKDGNSRGMGTVTFDMPIEAVQAVSMFNGQLLFNRVMHVKLDEKSLPKGDFAPPERPP
ALPRGLSGIGQGLGPGGQPIDATALNRGGGGGMGNMGPGGMDGMGFGGGMGRMGGMDNFG
GGMNNMERFGPSGMGRMNDMDHGIGGAFDRECGRNEMGMSRNNFGESFDRGMGSSLGMDR
MSSGMDRLGGGMDRLGGMERMDRVSDLDRLGGSGFDRMGSGLDRLGPSMDRLGSGLDRMS
SSMDRLGPAGFDCLGPSSLDRMSTGLDFASPMGMADRMNTGMERMGTNFDRMGSAGMDRF
PTTGLDRMGSAMDHMGAAGVGGQYDRPAEMERGGFGGNGFGGAGANARKGCQIFVRNLPY
DFTWKVLKDTFNTCGMVQYADIKTENGKSKGCGVVRFDNPETAERACRTMNGYRLNGREI
DVRIDRNA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgaggccgctgctacggagaaaccaggccagggggaaatgaacggcaaggcc
aagcatgaacccaataccaggaaagagaggccccagaagcgtggaggtggtcgctttgag
ccctatggaaacccatcaaagagataccgtgtgtttgtcagcaacatcccatacgatgtg
aaatggcaggcactcaaagatctaatgaaagaaaaagtgggtgaggtaacgtacgtggaa
cacttaatggatggagaaggcaaatcaaggggttgtgcgattgttgagttcaggactgag
gagctgatgaagaaggctgtggagaaggtcaacaagcacaacctgaatggtcggcccctg
aaggttaaagaggacccagatggtgtgattgcccagagggatttacacagggcccagggt
ggtggtggtggtggccccccaggcggccatggtggaatgaacatggggatggggatggat
cgcatgaatatggagcggatgaacatggactgcatgggcccaggaccgggcggcccaccc
atggtcaacatcccccccagcctcatgaacaactctaacatccccaatgagatcatccac
gggctgcaggctggcaagatcggaagcacggtcttcgtagctaacctggactacaaggtt
ggctggaagaagctgaaggaggtgtttggcatggcaggagtggtggtgcgtactgacatc
ttggaggacaaggatgggaatagcaggggcatgggcactgtcacctttgacatgcctatt
gaagctgtccaagccgtcagcatgttcaacggtcaactactgttcaatcgggtcatgcat
gtcaagctggatgagaagtccttgccaaaaggagactttgcaccaccggagagaccccca
gcactaccccgtggcctgagtggcattgggcagggactggggcctggtggccaacccatt
gacgccaccgcactgaacagaggtggtggtggaggaatgggcaacatgggacctgggggc
atggatggcatgggcttcggtggtggcatgggtagaatgggaggcatggataactttggt
ggaggaatgaacaacatggagcgctttggaccatcaggaatgggacgtatgaatgatatg
gaccatgggattggtggtgcttttgaccgggagtgtggtcgaaatgaaatgggcatgtct
cgcaataattttggagagtcctttgatagaggaatgggtagctcactgggcatggaccgc
atgagctctggcatggatcgcctgggtggtggaatggaccgtctgggtgggatggagagg
atggaccgtgtgtctgatctggacaggctggggggctctggctttgaccgtatgggctct
gggctggaccggctgggtcccagtatggacagacttggttctggcctggatcgtatgagc
tccagcatggaccgcctgggcccagctgggtttgactgcctaggcccatccagtctagac
cgcatgtccaccggcctggacttcgcctcccccatgggcatggcggaccgcatgaacacc
ggcatggagaggatgggaaccaactttgaccgcatggggtctgctggcatggaccgcttc
ccgaccaccgggcttgaccgcatgggctccgccatggaccacatgggcgctgccggtgtt
ggaggccagtatgaccggcctgctgagatggaacgtgggggctttggcggaaacggcttt
ggaggagccggagccaacgccaggaagggctgtcagatctttgtccggaatctgccctat
gacttcacctggaaggtgctgaaggataccttcaatacatgcggtatggtccaatatgct
gacatcaagacagagaatggcaagtccaagggctgtggcgtggttcgcttcgacaacccg
gagactgccgagagagcctgtcgcaccatgaatggctataggctgaatggaagagagatc
gacgtcagaattgatagaaacgcataa
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