KEGG   Salmo salar (Atlantic salmon): 100195142
Entry
100195142         CDS       T04363                                 
Symbol
rabggtb, pgtb
Name
(RefSeq) Rab geranylgeranyltransferase beta subunit
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
sasa  Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:sasa01006]
    100195142 (rabggtb)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    100195142 (rabggtb)
Enzymes [BR:sasa01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     100195142 (rabggtb)
Prenyltransferases [BR:sasa01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   100195142 (rabggtb)
Membrane trafficking [BR:sasa04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100195142 (rabggtb)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    100195142 (rabggtb)
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C SQHop_cyclase_N CCDC24
Other DBs
NCBI-GeneID: 100195142
NCBI-ProteinID: NP_001133643
UniProt: B5X2U5
LinkDB
Position
ssa14:complement(45390759..45400803)
AA seq 331 aa
MGTQVKDVVIKDDAPSALLLDKHADYIAAYGSKKDDYEYTLSEYLRMSGIYWGLTVMDLM
GQLTRMNQQEISDFIKSCQHDCGGISASIGHDPHVLYTLSAVQILSLYDNVNVLDVDKVV
EYVRGLQQEDGSFAGDKWGEIDTRFSFCAVATLALLGKLDSINMDKAVEFVLSCMNFDGG
FGCRPGSESHAGQIYCCTGFLSITGQLHQVNADLLGWWLCERQLPSGGLNGRPEKLPDVC
YSWWVLASLKIIGRIHWIDKSKLRSFILACQDEETGGFADRPGDMVDPFHTLFGVAGLSL
LGEGQIKDVNPVLCMPEDVLERLGLHPDLLS
NT seq 996 nt   +upstreamnt  +downstreamnt
atggggacccaagtaaaagatgtagtgatcaaagatgacgcccccagtgctctactattg
gacaagcatgcagactatattgctgcctacggctccaaaaaggatgactatgagtacacc
ctgtcggagtatctgcggatgtcaggtatctactggggcctgacagtgatggacttgatg
ggtcagctgaccaggatgaaccagcaggagatctctgacttcatcaagtcctgtcagcac
gactgtggaggcatcagcgccagcatcggacacgacccacacgtcctctacacgctcagt
gctgtacagatcctctcgttgtatgataacgtgaacgtgctggatgtggacaaggtggtg
gagtacgtcagaggattgcagcaggaggatgggtcgttcgctggagacaaatggggagag
atagacacacgattctctttctgtgctgtcgcaacactcgccttgctgggtaagctggat
tccattaacatggacaaggctgtcgagtttgttctgtcctgtatgaattttgatggcggg
tttggctgcagaccaggatcagagtctcatgccggacagatctactgttgtacaggtttc
ctgtctataacaggccagttacaccaggtgaatgctgacctgctgggctggtggctctgt
gagagacagcttccctcgggaggtctcaacggacgccctgagaaactgcctgatgtgtgt
tactcgtggtgggtgctggcctccctgaagatcattggtaggatccactggatagacaag
tccaagctgaggtcctttattctggcctgtcaggatgaggagacagggggctttgctgac
cgaccaggagacatggtggacccattccatactctgtttggcgtagcaggcctgtctctg
ctgggagagggacagataaaggacgtcaaccctgttctctgtatgcccgaagacgtgttg
gagaggctaggcttgcacccagacctcctcagctag

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