Salmo salar (Atlantic salmon): 100195149
Help
Entry
100195149 CDS
T04363
Symbol
utp15
Name
(RefSeq) UTP15, small subunit processome component
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100195149 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
100195149 (utp15)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100195149 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_IFT122_2nd
Beta-prop_NWD2_C
WD40_like
Beta-prop_NUP159_NUP214
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
100195149
NCBI-ProteinID:
NP_001133650
UniProt:
B5X2W0
LinkDB
All DBs
Position
ssa25:1289151..1322238
Genome browser
AA seq
528 aa
AA seq
DB search
MASFKSTKIPLYPKLGEKVTPDTLYWKNYKAPAQIKEFGAVTSIDFSPLAPHNYAVTAST
RIHIYGPFSQEPVKTFTRFKDTAYSGKFRSDGQLLVAGCEDSVVRLFDVSGKVALRVFKG
HTKGVHVTDFTSDCYHILTGSDDYTCRLWDIPNSTELTSYKEHTDYIRCGTTSKLNRDIF
ITGSYDHTLRVFDARVEKSVMTMDHSQPVESVLLYPSEGLLVSAGGRYVKVWDLLKGGQP
LVSLKNHHKTVTCLSLSSNGQRLLSASLDRHVKIYNTTNYKVVHNFDYAASILSLALAPD
DVSIVVGMTNGVLSIKHRKSPEEKKEVAGKQRMRPVYRVFVKGRNYVPKKDDFLVSKPVK
SHLAKYDKQLKRFNISKALDTALESWRKNRNPEIMVAVMKELDRRGTLKNALAGRDEQNL
SQLLNFLIGNVVDPRFTPVLVTATEMILDIYQAVVGQSSVVDRQLVRLQELVEREIDYQQ
DLLEVLGMLDTLFAASLPRKEVPCPGSSRPNGLAEGGLGAPGPQLQAA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattcaaatccacaaaaatcccattatatcccaaacttggagagaaagttact
ccggacacattgtattggaaaaactacaaggccccagcccagataaaggaatttggagca
gtcacaagcattgacttctcccccctggcaccacacaactatgcagtgacggcttctaca
cggatccacatctatggaccgttttctcaggagccagtcaagacgtttactcgcttcaag
gacacggcgtacagcggaaagttccggtcagatggtcagctcttggtggcaggatgcgag
gactccgtggtgcggctctttgatgtcagcggcaaggtggcgctcagggtgttcaaaggg
cacacaaagggggtgcatgtaacagatttcacctcagactgttatcacatcctgacgggc
tcagacgactacacttgtcgcttgtgggacatccccaattcgactgaactgacctcatac
aaggaacacacagactatatccgctgtggcaccaccagcaaactcaacagagatatcttc
ataaccggctcctatgaccacacactaagggtgtttgatgccagagtggaaaagagtgtg
atgaccatggaccacagccagcccgtggagagcgttctactctacccctctgaaggacta
ctggtttcagcaggagggcgctatgtgaaggtgtgggacctgctgaagggaggtcagcct
ctggtgtcactgaagaaccaccacaagaccgtcacctgcctcagtctcagcagcaacgga
cagagactgctctctgcctccctcgacaggcacgtgaaaatctacaacacaaccaactac
aaggtggttcataactttgactacgctgcctccattctcagtctggccctggctcctgat
gacgtgtccattgtcgtggggatgaccaatggcgtcctgagcataaaacataggaagagc
cctgaggagaaaaaggaagtggctggcaaacagagaatgcggccagtgtaccgcgtcttt
gtcaaaggaagaaactacgtcccaaaaaaggatgactttcttgtcagcaaaccagtgaag
agccatctggccaaatacgacaaacagctgaagagattcaacatctccaaggccttggat
accgccctggagtcgtggcggaagaacagaaatcctgagatcatggtggcggtgatgaag
gagttagatcgccgaggaactttgaagaacgctctggcaggacgagacgagcagaacctc
tctcaactcctcaatttcctgattgggaatgtagttgatcccaggtttacacctgtcctc
gtcactgccactgagatgattctagacatctaccaggcagtggtgggtcagtcttcagta
gtggacagacagcttgtgcgtctccaggagctagtggagagagagattgactaccagcag
gacctcctggaagttctgggaatgttggatactctattcgccgcatccctccccaggaaa
gaggtgccttgcccaggcagcagccggcctaacggcttggcagaggggggtttgggggct
ccaggaccacagctccaggccgcctga
DBGET
integrated database retrieval system
