Salmo salar (Atlantic salmon): 100195193
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Entry
100195193 CDS
T04363
Symbol
pdli1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100195193 (pdli1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
100195193 (pdli1)
Domain-containing proteins not elsewhere classified [BR:
sasa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
100195193 (pdli1)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Ehrlichia_rpt
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
100195193
NCBI-ProteinID:
NP_001133694
UniProt:
B5X331
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All DBs
Position
ssa18:complement(6289743..6304424)
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AA seq
310 aa
AA seq
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MPLRVVVQGPGPWGFRLVGGKDFEQPLTISRITPGSKAAQANLCVGDQILAIDGEPTESM
THLQAQNKIKGCLEEMILSIDRSETKIWSPLSSEDGKTNPYKMNLASEPQEVKPIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNTAVDDVKTIATAANEPSNIPTVADSE
VYKMLQENQEADEPPRQSASFKVLQEILESDPDKPSGFRSVKAPAAKMVSTVGNANKLPI
CDKCGSGIVGMVVKLRDKFRHPECYTCSNCDVNLKQKGHFFVEDQIYCEKHARERVTPPE
GYDVVTVFPK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacgagttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaggattttgaacaacctttgactatctcgcggatcacccctggcagtaaggctgcccag
gccaatctgtgtgtcggtgatcagatcctggccattgatggcgagcccactgagagcatg
actcacctgcaggcacagaacaagatcaagggctgcctagaggaaatgatcctctctatc
gacagatcagaaactaaaatctggtcaccgctctcttctgaggatggaaagaccaaccct
tacaagatgaatcttgcatctgagccgcaggaggtgaaacccataggttccgcccacaac
aggagcgccctgccattcgctgggtttggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctgtactcctccgagaacatcaaggactttaacacggccgtggatgacgtg
aaaaccattgccactgctgctaacgagcccagcaacatcccaacagtggcagactcggag
gtctacaaaatgctgcaggaaaaccaagaggctgatgagcctcctcgacagtccgcttca
ttcaaggtgctgcaggagattctggagtcagatcctgataagccctctgggtttaggagt
gtgaaagcacccgccgcaaaaatggtctcaacagtgggaaatgcaaacaagttaccaatc
tgtgacaaatgtggatcagggattgtagggatggttgtcaagttgcgggacaagtttcgt
caccccgagtgctacacctgctccaattgtgacgtcaacctgaaacagaagggacatttc
ttcgtggaggaccagatctactgcgagaaacatgcacgcgagcgagtgactccacccgaa
ggctatgacgtggtcacagtcttccccaagtag
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