Salmo salar (Atlantic salmon): 100195198
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Entry
100195198 CDS
T04363
Symbol
vps37a, vp37a
Name
(RefSeq) VPS37A, ESCRT-I subunit
KO
K12185
ESCRT-I complex subunit VPS37
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100195198 (vps37a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100195198 (vps37a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100195198 (vps37a)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
100195198 (vps37a)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100195198 (vps37a)
Exosomal proteins of colorectal cancer cells
100195198 (vps37a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
UEV
UQ_con
Motif
Other DBs
NCBI-GeneID:
100195198
NCBI-ProteinID:
NP_001133699
UniProt:
B5X341
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All DBs
Position
ssa08:complement(20573175..20575879), ssa08:complement(20779872..20782796)
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AA seq
385 aa
AA seq
DB search
MNWLFPLSKGSGPLPPLNSLQQQRQRQIESLKAAHSSLAEIQKDVEYRIPFTVNNSTISV
NILLPPQFPQEKPVVSVYPPVGHHLVDSNNGTMVTSPLITNFGMHSDLGKVIQSLLDEFW
KSPPVLTSGPTGFPYNMYKPSGMPPYPTQSFHYGPRPVGPTPPPMPHAGVEGAHGHGPPW
AAAPVYGLITDLPLPVPTADSQAGLNGHMYKMPEIPETFPELSEMSVSQLKDMSEQEDVL
LELFVCLPQLKQVTTDKEELVNSIVDMAKKNLQLEPQLEGTRQEMLFKYEQLTQNKSAFE
TKMQRQHDISESCSLSALQARLKVAAHQAEEESEETAESFLEGKTDIDDFLANFMEKRTL
CHSRRAKEEKLQQSINTHGQFPSSH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcttttccccttatccaagggttccggacctctcccacctctcaatagcttg
cagcaacaaagacaacggcagatcgagtctctcaaagctgcccactccagcttagcagag
atccagaaagatgtggagtacagaatccctttcacagtcaacaactcaaccatcagcgtc
aacatcttgcttccgcctcagtttccccaggagaaaccagtagtcagtgtgtaccctcca
gtaggacatcacctggtagacagcaacaatggcaccatggttaccagccccctcattacc
aattttggaatgcactcggatctgggcaaagtcatccagagtctcctggatgagttctgg
aagagtccaccggtcctgacatctggccccaccggcttcccttataacatgtacaagccg
tcggggatgcctccctaccccacacagagcttccactacgggccgcgccccgtgggcccc
accccgccccccatgccccacgcgggtgtagagggagctcacggtcacggccctccctgg
gcagcagcccctgtctacggcctcatcaccgacctgcctctccccgtacccaccgcagac
tcccaggctgggttgaacggccacatgtacaagatgcctgagattcctgaaacatttcct
gagctgtctgaaatgagtgtgtcccagctgaaggacatgagtgagcaggaggacgtgctg
ctggagttgtttgtgtgtctgccccagctcaaacaggtcaccactgacaaggaggagctg
gtcaacagcatcgtggacatggccaagaagaacctgcagctggaacctcagctggagggg
acgagacaagaaatgctgttcaagtacgagcagctaacccagaacaaatcggcctttgag
accaagatgcagagacagcatgacatcagtgagagctgcagtctgagtgccctgcaggct
cgtctgaaggtggcagcccaccaggcggaggaggagtcagaggagacggccgagagcttc
ctggagggcaagacggacatcgacgacttcctggccaacttcatggagaagaggacgctc
tgccatagcagaagggccaaagaggagaagctgcaacagtccatcaacacacacggacag
ttccccagcagccactga
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