Salmo salar (Atlantic salmon): 100195240
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Entry
100195240 CDS
T04363
Symbol
tisd
Name
(RefSeq) Butyrate response factor 2
KO
K18753
butyrate response factor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100195240 (tisd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100195240 (tisd)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100195240 (tisd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tis11B_N
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Zn_finger_prot
Torus
Motif
Other DBs
NCBI-GeneID:
100195240
NCBI-ProteinID:
NP_001133741
UniProt:
B5X3D7
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Position
ssa18:10105043..10108244
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AA seq
411 aa
AA seq
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MSANVLSAFYDIDMLYKQDMNMNAVNHINSILDKKAVGPPVTAHSSNSSFAPGFFRRSST
TNMEAMTNNSNKFSANSYSSLMENATSSSTAIMNKENKFRDRTYSENGDRSQQLQIVQQK
PGSQINSTRYKTELCRPFEENGACKYGEKCQFAHGYHELRNLSRHPKYKTEPCRTFHTIG
FCPYGPRCHFIHNADERRPAPSNANVQGEPKSARELCGFGQSGDVPQQVGYNRDRPKLHH
SLSFSGFSSHHGLESPLLESPTSRTPPPPSNSSCSLNYYEDVLSPNSMSCVNSAFSFPGH
DLKALLAPLALHTQNGYGNNHFNGAYYGNIQANMCPPSPPSYNMSHLQSLRRLNESPVFD
SPPSPPDSLSDRDSYASGSLSSSGSLSGSESPSLDAGKRLPIFSRLSISDD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaacgtcttgtccgctttctacgacatcgacatgctttacaagcaagatatg
aacatgaacgctgtgaatcacatcaatagcatactggacaagaaagcggtggggcctcca
gtgaccgcacacagctccaatagttctttcgcgccgggatttttccgtagaagctcgacc
accaacatggaagcaatgaccaacaacagcaacaagttttccgccaactcctacagtagt
ttgatggagaacgcaacgagcagcagcactgccataatgaacaaggagaacaagttccgc
gaccggacatacagcgagaatggggaccgcagccagcagctgcagatcgtgcagcagaag
ccaggctctcagatcaactccacccgctacaagaccgaactctgcaggcccttcgaggag
aacggagcgtgcaaatacggagagaaatgccagttcgcgcacggctaccatgagctgaga
aatttgtctcgtcaccctaagtataaaaccgagccgtgtcgcactttccacactattggc
ttctgcccctacggtccccgctgtcattttatccacaatgcagatgagcgcagacccgct
ccaagcaacgccaacgtgcagggggaacccaaatcagctcgcgagctctgcggctttggt
caaagcggcgatgtgccgcagcaagttgggtacaaccgggacagaccaaaacttcaccac
agcctgagtttttcaggcttttccagccaccacggacttgagtcgccactactcgagagc
cccacgtcgcgcacaccaccacccccctcaaactcctcttgctctctcaactattatgag
gatgtactgtctcccaactccatgtcttgtgtgaacagtgcattcagttttcctggacat
gacctgaaagccttacttgctcccctggccttgcatacgcaaaacggctatggcaacaac
catttcaatggtgcctactacgggaacattcaagccaacatgtgccccccttctcccccc
tcatacaacatgagccacttgcagtccctgcgccgcctcaacgaatcaccggtgttcgac
tcccctcctagcccgcccgactctctctcagaccgggacagttatgcgagcgggtccctc
agctcttctgggagtcttagcggctcagagtctccgagtttggatgctgggaaacgtttg
ccaatcttcagcaggctgtcgatttctgatgactaa
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