Salmo salar (Atlantic salmon): 100195320
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Entry
100195320 CDS
T04363
Symbol
copb
Name
(RefSeq) Coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100195320 (copb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100195320 (copb)
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100195320 (copb)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100195320 (copb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
100195320
NCBI-ProteinID:
NP_001133821
UniProt:
B5X3S5
LinkDB
All DBs
Position
ssa11:24736362..24743555
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIGLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKFRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRPLIIEKMLEVFHAIRTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKEAGEGKPEEEVSAAPAAKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVTIVQDKKRQNSFVAESMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVLVQADDPISFMQLTAKNETSSKEDQFQLSLLAAMGTTLKKEANDPMASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTNDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIADLNEYLHHILSSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTSA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtttgttacactttgatcaatgttccaaatgactccgaacca
ccatcggaagtcagtctcaaagcagacttagaaaaaggagagatcaaggcaaagacagag
gccctgaagaaggtaatcatcatgatactgaatggagagaagctgccaggcctactgatg
accatcatccgatttgtcctcccacttcaagaccacaccattaaaaagcttctgctagtc
ttctgggagattgtccccaagacgactccagatggcaagctgcttcaggagatgatcctg
gtctgtgacgcctacagaaaggacttgcagcaccccaacgagttcatccgtggatccacc
ctgcgcttcctgtgcaagttgaaggagtctgagctgctggagcccctcatgcccgccata
cgcgcctgcctggagcaccgccacagctacgttcgccgcaatgctgtactggccatctac
accatctacaggaactttgaaaatctcatcccagatgcccctgagttgatccatgatttc
cttgtgaatgaaaaagatgccagctgcaagagaaatgctttcatgatgctcattcacgca
gaccaggacagagctctggattacctcagcacctgcattgatcaagtgcatacatttgga
gatattctccagttggtcattgtggagctgatttacaaggtgtgccacgctaacccgtct
gagcgtgcccgcttcatccgctgcatctacaacctgttgcagtcctccagcccagccgtc
aagtacgaggcagctggcactcttgtcacgctgtccagcgcacccactgccattaaggct
gctgcccagtgttacattggcctgattatcaaggagagtgacaacaacgtgaagctgatc
gtcctggatcgtctgatagagctgaaggagcatcccactcatgaacgtgttctccaggac
ctggtgatggacattctgcgtgttttgagcacgcctgacctcgaggtccggaagaagacc
ctgcagctggccttggacctagtctcatcccggaacgtagaggagttggtgatagttctg
aagaaggaggtgattaagaccaacaacgtgacggagcatgaggacactgataaattcagg
cagctgctggtgcgcaccctccactcatgcagtgtacgcttccctgacatggcggccaat
gtcattcctgtgctgatggagttcctgagtgacactaacgaggcagcggcggctgatgtg
ctggagtttgtgagggaggccattcagaggttcgacagcctgaggcccctcatcatcgag
aagatgctggaagtcttccacgccatcaggactgtcaagatctacagaggagcgctttgg
atcctgggagagtactgcagcactaaagaggacattcagagtgtgatgacagaagtgcgc
aggtcgcttggagagatccccatagtagagaacgagatcaagaaagaggctggggagggg
aagccagaagaagaggtgagcgcagcgccagcagccaaactggtgacagagatgggcacc
tacgtcacacagagcgccctcagctcctcccgaccctcaaagaaggaagaggacaggcct
cctctcaggggcttcttgatggacggagacttctatgtggcagcctcgctggccacaacc
ctgaccaaagtggccctgcgatatgtcaccatagttcaagataaaaagagacagaattcc
tttgtggctgagtctatgctgatcatggccaccatcctccacttgggcaagtcctctctg
cccaagaagcccatcacagacgacgatgtggaccgcatctctctgtgcctcaaagtgctg
tccgagtgctcgcccctcatgaacgacatctttaataaggagtgccgcaagtccctgtct
cacatgctcactgttaggctggaggaggagaagctatctcagaagaaagagtcagagaag
cggaacgtgctggtgcaggcagacgaccccatttcctttatgcaactgacggccaagaac
gagacgtcctccaaggaggaccagttccagctcagtttactggctgccatgggaaccact
cttaaaaaagaggctaacgaccccatggcctccaaactcaacaaggttacccagctgact
ggtttctcagacccagtctatgctgaggcctatgtccatgtcaaccagtatgacattgtg
ctggacgtgctggtcgtcaaccaaaccaacgacacccttcagaattgcaccctggagctg
gcgacattgggtgacctcaagctggttgagaagccttctcctctcactctggcaccccat
gactttgccaacatcaaggctaacgtcaaagtggcgtccacagagaatggcatcatattt
ggcaacatagtgtatgacgtatcaggagctgccagcgacaggaactgcgtggtcctcagt
gacatccacattgacatcatggactacatccagccagcctcgtgcacagacgcagagttc
agacagatgtgggctgagtttgagtgggagaataaggtgacagtgaacaccaacattgca
gacctgaacgagtacctccaccacatcctcagctccaccaacatgaagtgcctgacccca
gagaaggcactttctggcttctgtggcttcatggctgccaacctgtatgcccgctccatc
ttcggtgaagacgccctggccaacgtcagcattgagaagcccatccacctgggtcctgat
gcccctgtcaacggacacatccgcatccgggccaagagccaaggtatggcgttgagtctg
ggtgacaagatcaacctttcccagaaaaaaacatctgcataa
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