Salmo salar (Atlantic salmon): 100195334
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Entry
100195334 CDS
T04363
Name
(RefSeq) K0020 protein
KO
K14844
pumilio homology domain family member 6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100195334
03009 Ribosome biogenesis [BR:
sasa03009
]
100195334
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
100195334
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100195334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Bmt2
RXT2_N
Motif
Other DBs
NCBI-GeneID:
100195334
NCBI-ProteinID:
NP_001133835
UniProt:
B5X3V8
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All DBs
Position
ssa01:complement(117182952..117200214)
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AA seq
643 aa
AA seq
DB search
MEPKKKIFSPKGGKKLIQKGKEGTGKPGTKPTGKSPRKRPFKPHSGEKGKTFEKTGGKGA
PKKFLNKKPTDGKYIKPTDGKFTKKRKFIPGKAKEEEGSEAKKPKWDEFKQQKKELKQNR
QQTEKKESYQIVSRAKQVWEMVRRKDCDKEKRIKLMKELQELVKGKIKTIAFAHDSTRVL
QCFIQFGTDKQRQEVFDELKDDMVELSKSKYARNIVKKFLMYGSKEQVAGVMVGFKGKVR
QMLRHSEASSVVEYAYNDKAILSQRLMLTEELYGTTFQVFKSAVCPTLEKVLEANPDKVN
GILEEMKQILTPMATKEAVIKHSLVHKVFLDFFLHAPAKQRTEMIESIRESVVYMAHTHD
GARVAMHCLWHGTPKDRKVIIKTMKTYMEKFAMGEFAFLVLIAAFDCIDDTKLVKQAVLS
EILASLPDVITNKNGKKVLLYLLSPRDPAHLLPEIIQVLEKGDGNAHSKKDVALRRKELL
EAVSPHLIQHLCDHARTMAMDKASSVTVSDILGSAIGDLHPAMEAVAELAADDFTPGGVA
GQLHMAEHPAGHLVLKWLIEQDTKMKEVGREERFSRVLLDKVGMDKLKTWAAVNRGAIVL
CSLLNSADETVAEEVREALKAYTPELQKIQNCKGVEVLLEKLA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggaacccaaaaagaaaatattttcccctaaaggtggcaagaagttaatacagaaagga
aaagaaggtacaggtaaaccggggaccaaaccaacaggcaaatcaccaaggaaaaggcca
tttaaaccccacagtggagaaaagggcaagacgtttgagaagactggcggaaagggggct
ccaaagaaattcttgaacaaaaaacccacagatggaaagtacatcaaacccacagatgga
aagttcaccaaaaagcgaaaattcatacctgggaaggccaaggaagaggaaggttccgag
gccaagaagcccaaatgggacgagttcaaacagcagaaaaaggagctgaaacagaaccgg
cagcagactgaaaaaaaggagagttatcaaatagtgagcagagccaagcaagtgtgggag
atggtcagaaggaaagattgcgacaaagagaagaggatcaaactcatgaaagagcttcag
gaacttgtgaaaggaaagataaaaacaatagcatttgctcacgactccaccagagtcctc
cagtgtttcatccagtttgggaccgacaagcaaagacaggaggtttttgatgaactcaaa
gatgatatggtcgagctgagtaaatcaaagtatgcccgaaatattgtgaagaagttttta
atgtatgggagcaaagagcaggttgcgggtgtgatggtgggcttcaaggggaaagtgagg
cagatgctgcgtcactcggaggcgtcgtcggtggtggagtatgcttacaacgacaaggcc
atcctctcccagagactcatgctcaccgaggagctctacggaaccacattccaagtcttc
aagtcggcagtgtgccccacgctagagaaggtgctggaggcgaacccagacaaggttaat
ggcattttggaggagatgaagcagatccttacccccatggccacaaaagaggctgtgatc
aaacattctctggtgcataaagtgtttctggacttcttcctgcatgccccagccaaacag
aggactgaaatgattgagtcaataagggagtctgtggtgtatatggcccacactcacgac
ggagctagagtagcaatgcactgcctgtggcatgggacacctaaggacagaaaagtcatc
attaaaaccatgaagacctacatggagaagtttgcaatgggagagtttgctttcttagtc
ctcatcgctgcctttgactgcatagacgacaccaagctagtgaagcaggccgtcctatca
gagattcttgcttccctgcctgatgtcatcactaataagaatggaaagaaagttctgctg
tacctgctcagcccgcgagaccctgcccacctgttacctgaaatcatccaggtgctggag
aagggggacggaaacgcccacagcaagaaggatgttgcccttcgccggaaggagctcctg
gaggcggtgtctccgcacctcattcagcacctgtgtgaccacgcccgcaccatggcaatg
gacaaggcctccagcgtcaccgtcagcgacattctggggtccgccattggggacctgcat
cctgccatggaggctgtggctgagctggctgctgacgacttcacaccaggaggagtggcg
gggcagctgcacatggctgaacaccctgctgggcacctggtgctcaaatggctgattgaa
caagacaccaagatgaaggaggttgggagagaagagcgtttctccagggtcctgttggac
aaggtggggatggacaagctaaagacgtgggctgcagtgaaccgtggggctatcgtgctc
tgctctctcctgaacagtgcggatgagactgttgcagaggaggtcagggaggcattgaag
gcctacactccagaactacagaagatccagaactgtaaaggagtggaagttcttttggag
aaactggcctga
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