Salmo salar (Atlantic salmon): 100195359
Help
Entry
100195359 CDS
T04363
Symbol
tlr13
Name
(RefSeq) Toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
100195359 (tlr13)
Pattern recognition receptors [BR:
sasa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100195359 (tlr13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
LRR_6
LRR_LRWD1
LRRNT
LRR_EndoS
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
100195359
NCBI-ProteinID:
NP_001133860
UniProt:
B5X405
LinkDB
All DBs
Position
ssa19:10226305..10231032
Genome browser
AA seq
962 aa
AA seq
DB search
MELKITMSGKGHGSTYSQLSFFLWILLYFWVLFNPVNGYSMKHCRIRESLNTSVLCDGRN
LNAVPADIPSLVRTVNIAKNNISQIKSEDFKDLTFLKMLIMYSNRISHVENGSFSDLVAL
EQLNLSFNKLTSLSDQMFKGLDNLTVLHLDNNHISSISSSFQLLFSLKVLNLTSNKLHCF
KELQHILQLPSLLKLFIGNNSLTSLQSQEISNRSIGLTELDLSRNPLEIFSVTADIFPYL
KNLDLSFCGINGSMEWDVADRYFLRNVSSLDLSGIHMSLQGISSVLQSINLSLASLGLGK
IGRDNLINVACHIPTLKTLRLQCNNFSTVSDKLLQSCTQVTDLDISGNNITDLSEAAFRS
IKGLKTLILDNDGLSSVPNATRNLPTLKKLDLSYNIIKTLGCSDFSNLRRLEKLYLNNNL
ISNLEGCVFQDLRALNSLTLRRNRILNLGDAFTKGLQHLKSLDLGFNKLTNIRTKYFKSL
RSLEDLALYDNQIKTLEDGAFVGLAKLKNLVLLNNVIGKSEIRGAVFKGLRSLKTLNMAS
NAIKYEKDELLQPPPFTDLSSLENLYIFSQHYSKYKRQSYLPSNFLEGLKMLSEFQAGNL
HIMSLHPDVFIYTPQLLSLDISQNWFKALSPELFHPIPKLKRLTISKTELESLDFLIEAN
LTQVHFLKVRQNKITWTNETVLHSLPALTLLDMQRNPFICDCRNAWFVHWAESNNQTQVA
YAHDYPCNYPDDLKNTKLLDLDTHSCSVDLGVFYFISTTSLVLLTLLGSFIYHHLRWQVV
YAYYLFLAYLHDTKRRNRQAPHQYDAFISYNTHDESWVVRELLPELEGEQGWKLCLHHRD
FQPGKPIIENITDAIYRSRKTICVITHQYLESEWCSREIQVASFRLFDEQKDVLILVFLE
EIPDHQLSPYHRMRRLVKRRTYLSWPRAGEDTRVFWQKLQVALETRDLPAEENPILTGVE
RQ
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaaataaccatgtcaggaaaaggacatgggtctacatattctcagttgagt
ttctttctatggattcttctgtatttctgggttctatttaatccagtaaatggttactca
atgaaacactgcagaatcagggaatctctaaatacgtctgtgctatgtgatggcaggaac
ctcaatgccgtaccagcagacatcccatcattggtgagaactgtaaacatagcaaagaat
aacatttcacagataaaaagtgaggacttcaaagatctaacgttcctcaaaatgttaatc
atgtacagcaacaggatctctcatgtggagaatgggtctttttcagacctggtggctcta
gagcagctgaatctgtcctttaacaaactcacttccctctcagaccaaatgtttaagggc
ctggataacctcacagtactacacctggataacaaccacatctcaagtatctcatcatct
tttcagttactcttcagcttgaaggtactgaacttaaccagcaacaaactgcattgtttc
aaggagcttcagcacattttacaattaccaagcttgctgaagttgttcattgggaacaac
agcttgacctctttgcagtcacaggaaatatcaaataggtcaatagggctgacagagctg
gatctatccaggaatcctctggagatcttcagtgtcacagcagatatttttccctatctt
aagaatttagacctctccttctgtggcattaatggaagcatggaatgggatgtagcagac
aggtattttctgaggaatgtgagcagtctcgacttgagtggcattcacatgtctttacag
gggattagttcagtgctccagagcatcaacctttctttggcatctctggggctgggtaaa
ataggaagagataatctcattaatgtagcctgccacatacctacactgaagacactccga
ttgcaatgtaataacttcagtactgtctctgacaagctgctgcagtcctgcacacaggtg
actgacctggacatatcaggtaataatattactgacctgtcagaagccgcttttcgatca
attaaaggtcttaaaactctgatactagacaatgacggcctctcttctgtgccgaatgct
acaaggaatctccccacattgaaaaaattggatctcagctacaacatcatcaaaacttta
ggctgctcggatttctccaatctaagaagactcgaaaaactctatcttaacaacaattta
atctcaaaccttgaaggttgtgttttccaggatttaagggccttaaatagcctgacactt
agaaggaaccgcatcctaaacttaggtgatgctttcacaaagggtttgcaacatttaaag
agcttggatttaggattcaataaactaactaacatcagaacaaagtacttcaaaagctta
agatcacttgaggatttggctttatatgacaatcaaataaagacactggaagatggggcc
tttgtgggtttggccaaacttaaaaatcttgttctgctaaacaatgttataggtaaaagt
gaaatccgaggtgctgtgttcaaaggacttagaagcttaaaaactctcaatatggcttcc
aatgctatcaaatatgaaaaagatgaactactccaaccaccacccttcactgacctgtca
tctctggaaaacctctacatatttagtcagcattatagtaagtataagagacagtcttat
ctaccttccaactttcttgaaggtctgaaaatgttatcagagttccaagcagggaatctt
catattatgtccctgcaccctgacgtattcatttacacaccccagttgttgtcccttgat
atcagccagaattggttcaaagccctctccccagagctctttcacccaatccccaagctc
aaaagactcaccatctccaaaactgaacttgagtcattagatttccttatagaagccaat
ctcactcaagttcatttcttaaaggtgagacagaataaaattacatggaccaatgagaca
gtgctgcactctctcccagccttaactctcctggatatgcaaaggaatcctttcatttgt
gactgcagaaatgcttggtttgttcattgggctgagagcaacaaccaaacacaagttgct
tatgcccatgactatccatgtaactatccagacgatctcaagaacactaaactgttggac
ctggacacccactcctgttcagtggacctaggcgtcttctacttcatctcaaccacttct
ctggtcctcctcaccctgctggggtcctttatctatcatcacctgaggtggcaggtggta
tatgcctactacctcttcctggcttatctccatgacaccaagcggaggaacagacaagct
cctcatcagtacgatgccttcatttcctacaacacccatgatgaatcctgggtcgtgagg
gagctgctgccagagttggagggagagcagggctggaagttgtgtcttcaccaccgggac
ttccagccaggtaaacccatcatagagaacatcacagacgccatctacaggagcaggaaa
accatctgtgtgatcacccaccaatatctggagagcgagtggtgctccagagagatccag
gtggccagcttccgtctttttgatgagcagaaggatgtgctgatcctggtgtttctcgaa
gagatcccagaccaccagctctcaccctaccaccgcatgaggaggctggtgaagagacgc
acctacctgagctggccaagagctggggaggacacaagggtcttctggcagaaactccag
gtggctttggagaccagggacttgcctgcggaagagaaccccatcctcaccggggtggag
agacagtga
DBGET
integrated database retrieval system