Salmo salar (Atlantic salmon): 100195385
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Entry
100195385 CDS
T04363
Symbol
sfrs9
Name
(RefSeq) Splicing factor, arginine/serine-rich 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100195385 (sfrs9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100195385 (sfrs9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100195385 (sfrs9)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
100195385 (sfrs9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100195385
NCBI-ProteinID:
NP_001133886
UniProt:
B5X448
LinkDB
All DBs
Position
ssa01:complement(119726930..119734021)
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AA seq
252 aa
AA seq
DB search
MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGLGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP
PSGSWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMAN
IRVHGEHGASYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHP
VTHHSPPPRHYR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggatgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggactcggtgactccaagctgcgtgtagaataccctcgctcctct
ggtgccaaatttagtggccctatgggaggcggagaaagaggagaaggagggggtcctaag
gggaggtttgggcctccaactcggagatctgagttccgggtgatagtgactggcttgccc
ccatcagggagctggcaggacctgaaagaccacatgcgtgaggcaggggatgtgtgtttc
gccgacgtgcagcgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggag
tatgccctgcgcagactggacaggactgagttccgttcccatcagggggagatggcaaac
attcgtgtccacggagaacatggtgccagttatggtcgctcgcagtcccgctccagatcc
ccccgggggcgtggctactcaccacctccttacaaaagcagagggtcccctccacagcgc
taccaatcacctccacggcgccatgtgtcccgtcatagcccaccagcgaggcgacaccca
gtaacgcaccacagcccacccccacgccactatcggtag
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