Salmo salar (Atlantic salmon): 100195503
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Entry
100195503 CDS
T04363
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
KO
K24993
paraspeckle component 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100195503 (pspc1)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100195503 (pspc1)
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GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
100195503
NCBI-ProteinID:
NP_001134004
UniProt:
B5X4R3
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All DBs
Position
ssa17:17881911..17924054, ssa17:complement(20059701..20061546)
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AA seq
545 aa
AA seq
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MAHRNLKQVNIQNNAPSRKPQQQQQYHHQQQHTKRNMDSPGMERRPNVADGKTPPPKPPT
AASPAAEGEGEAGESQEMTLDIKSFRRPGEKTFTQRCRLFIGNLPTDLTEDEFKKLFSKY
GEANEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPIRIRFATHGSALTVRNLSP
VVSNELLEEAFSEFGPVERAIVVVDDRGRPTGKGFVEFANKPSARKALDRCADGALLLTT
SPRPAIVEPTEQLDEEDGLPEKLLVKSVHYHKEREHPPRFAQPGTFEFEYSSRWKALDEM
EKQQRDQVERNIREAKEKLEQEMEAAKHEHQLMMMRQDLMRRQEELRRLEELRNQELQKR
KNIEMRHEERRRQEEEMMQRHREQEEMRRQPDGFKPNYADNREQEMRMGELGPRGAINMG
DGFNPASVAGASVNQGPPQMMGIGMSGRAGVMGPEGTPNMGTPNMMPDNGAMLRNDRFPQ
GAPNQIGSSPMSGRPGVESPQQQQVVGAGLMGAGPGPAVGGPPSIGRGIPVVGNYEGPNN
KRRRY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccgaaatctaaaacaggtcaacattcaaaacaacgcaccgtcgcggaaacct
cagcagcagcagcagtaccaccaccagcagcagcacacaaagcgcaacatggactctcca
ggcatggagcgaaggccgaatgttgcggatgggaaaaccccaccaccaaagccgccgact
gctgccagccctgcggcagagggggagggtgaagccggagagtcgcaggagatgactctg
gatataaagagtttcaggagacccggggagaaaaccttcacgcagcgatgtaggttgttc
atcggtaacctcccgacagacctcacggaggatgagttcaaaaagctgttttccaagtat
ggcgaggctaacgaggtgtttatcaaccgagaccgaggattcggcttcattcggctggaa
accaggacgttggcggagattgccaaggcagagttggacggcacagtgctggggaaccga
cctatccggatccgcttcgccacgcacggctctgccctcacggtgcggaacctttcgccc
gtggtctccaacgagctccttgaggaggccttctcggagttcggccccgtggaaagggct
atcgttgtggtggacgaccgtggaaggcccacggggaagggcttcgtggagtttgccaac
aaaccttctgctcgtaaagccctggatcgctgtgctgacggggcgctgctgctcaccacg
tctcctcggcctgccatagtggaacccaccgagcagctggatgaagaggatggactccca
gagaagttgctggtgaaatctgtacactaccacaaggagagggagcaccccccgcgattt
gcccagccggggacatttgagtttgagtactcgtcccgctggaaggccctggacgagatg
gaaaagcagcagagagaccaggttgagcgcaacatccgagaggccaaggagaagctggag
caagagatggaggccgccaagcacgagcatcagctcatgatgatgagacaagacctgatg
aggcgtcaagaggagctgagacgtctggaggagcttcgcaaccaggagctgcagaaacgc
aagaatatagagatgagacatgaggagaggcgtaggcaggaggaggagatgatgcagcgc
catcgagagcaggaagagatgagacgccaaccggacggcttcaagccaaactatgcggac
aacagagaacaggaaatgagaatgggtgaactgggccctcgtggagccattaatatggga
gatgggtttaaccccgcctctgttgccggggccagtgtaaaccagggaccccctcaaatg
atgggcataggcatgagcggaagggccggagtcatgggccccgaaggaactccaaacatg
ggcacaccaaacatgatgccagacaatggagccatgttgcgcaacgataggttcccccag
ggggctcctaatcagattggttcgtcccccatgagtggccgtccaggtgtcgagtcccct
cagcagcaacaggtagtgggggcagggcttatgggggcagggcctgggcctgcagtgggg
gggccaccaagcatcgggaggggaatccctgttgtgggaaactatgaagggcctaacaac
aaacgtcgcagatactga
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