Salmo salar (Atlantic salmon): 100195518
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Entry
100195518 CDS
T04363
Symbol
ogg1
Name
(RefSeq) 8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100195518 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100195518 (ogg1)
Enzymes [BR:
sasa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
100195518 (ogg1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100195518 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
100195518
NCBI-ProteinID:
NP_001134019
UniProt:
B5X4U2
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All DBs
Position
ssa13:17571729..17582152
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AA seq
401 aa
AA seq
DB search
MSQHALLSAGTKSWRSLACSRSELRLDLTLGCGQSFRWRETGDGHWTGVMGGRVWTLTQT
DDTLWYHTYNSPNTIGGDGRKRSAGSLLQGSGKRSKGVIEVKEEEEGEPVAVTPDPDRKE
EELLNDYFQLKVKLGDLYRDWGAADPHFNSIAKIFTGVRMLRQDPTECLFSFICTSNNHI
SRIQGMVERLCQSLGTPLCQLDQTSYHDFPSLHALADNSVEARLRDLGFGYRARFLQQSA
RQILDSHGGPHWLQGLRSAPYLQARDALRTLPGVGPKVADCVCLMSLEKACVVPVDTHVW
QIAKRDYSCAAGNGQKSLTDKVHRQIGDFFRQLWGPYAGWAHSVLFCSDLKKFQKLKETH
CLKQEEEKKKVKIKVEGEGMTKKIKKMCNRKVKMCVKEEVG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgcattgctgtcggcggggaccaagtcatggcgctccctggcctgctca
cgatcagagctccgtttggacctcacactaggctgcggacagagcttccgctggcgagag
acaggggatggccactggaccggagtgatggggggacgagtgtggactctcacccagaca
gacgacacactatggtaccacacatacaatagccccaacaccataggaggggatgggagg
aagcggagtgcaggttccctgctccaggggtcagggaaaagatccaagggagtgatagag
gtgaaggaggaagaagagggggagccagtggctgtgacccctgacccagacagaaaggag
gaagagctgctaaatgattatttccagctgaaggtgaagctgggggatctgtacagagat
tggggagcagccgacccacactttaacagcattgccaagatcttcacaggtgtgcgtatg
ctgcgtcaggaccccacagagtgcctgttctccttcatctgcacctctaacaaccacatc
tctcgtatccagggcatggtggagaggctgtgccagtccttgggcacccctctgtgtcag
ctggaccagaccagctaccacgacttcccctccctgcatgcactcgcagacaacagtgtg
gaggctcgtctgagggacctggggtttgggtacagggccaggttcctgcagcagagtgcc
agacagatcctggactctcacggtgggccccattggctccaggggctccgcagtgccccc
tacctgcaggcacgtgacgcactgcgcaccctccccggggtaggccccaaggtggcagac
tgtgtgtgtctgatgtctctggaaaaggcctgtgttgtgcctgtggatacacacgtgtgg
caaatcgcaaaacgagactacagttgtgcggcgggcaatgggcagaagagcctcacagac
aaggtccaccgtcaaataggggacttcttcaggcagctatggggtccgtatgctggttgg
gcacactcggtgttgttctgttctgacctgaagaagttccagaagctgaaagaaacacac
tgtctgaaacaggaggaggagaagaagaaggtcaagataaaggtggagggagagggaatg
accaagaaaattaaaaaaatgtgtaatagaaaggtgaaaatgtgtgtgaaggaggaggtg
gggtga
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