Salmo salar (Atlantic salmon): 100195665
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Entry
100195665 CDS
T04363
Symbol
ruxe
Name
(RefSeq) Small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100195665 (ruxe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100195665 (ruxe)
03041 Spliceosome [BR:
sasa03041
]
100195665 (ruxe)
03032 DNA replication proteins [BR:
sasa03032
]
100195665 (ruxe)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
100195665 (ruxe)
Spliceosome [BR:
sasa03041
]
Complex A
U1 snRNP components
Sm proteins
100195665 (ruxe)
U2 snRNP components
100195665 (ruxe)
Complex B
U1 snRNP components
100195665 (ruxe)
U4/U6.U5 tri-snRNP components
100195665 (ruxe)
Complex C
U2 snRNP components
100195665 (ruxe)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
100195665 (ruxe)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
100195665
NCBI-ProteinID:
NP_001134166
UniProt:
B5X6H9
A0A1S3LD32
LinkDB
All DBs
Position
ssa22:25909615..25914987
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVAT
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaagtccagaaggttatggtgcagccaattaacctt
attttcaggtatctacagaaccgctctcgtatccaggtgtggctgtatgaacaggtgaac
atgcggatagaaggctgcatcatcggctttgatgaatacatgaacctggttctggatgat
gctgaggaggttcacatgaagaccaagaacaggaagcccttggggaggatcatgctgaaa
ggagataacatcaccctgctacagagtgtagccacctaa
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