Salmo salar (Atlantic salmon): 100195720
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Entry
100195720 CDS
T04363
Symbol
pus1, trua
Name
(RefSeq) pseudouridylate synthase 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sasa03016
]
100195720 (pus1)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100195720 (pus1)
Transfer RNA biogenesis [BR:
sasa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100195720 (pus1)
Prokaryotic type
100195720 (pus1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
100195720
NCBI-ProteinID:
NP_001134221
UniProt:
B5X747
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All DBs
Position
ssa01:complement(131541900..131545527)
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AA seq
392 aa
AA seq
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MMSEEESGNMLIKPLKRVEEGNGESGENGHIRKKLKSVEPTGNERKHPKRKVVLLLAYSG
KGYYGMQRNAGSSQFKTIEDELVTALIKSGCIPDNHGDDMKKMSFQRCARTDKGVSAAGQ
VVSLKLWMIEDVMEKINSNLPPQIRVLGLKRVTGGFNSKNSCDARTYSYMLPTVAFSPKD
YYTKNYAAFRLEPETLQRVNQLFGSYKGTHNFHNFTSQKAAWDPSARRYITEMSCGEPFV
RGGAEFAEITVRGQSFMMHQIRKMIGLVIAVVKGYSGDEVLKRSWGEEKVDVPKAPGLGL
VLEKVHFDRYNKRFGGDGLHECLEWTEEEQAILAFKEEHIYPSIVETECQEGSMASWMAT
LPIHDFEATATGAQDKDREQDDEEGNRSDSAL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgaagaagagtcaggaaatatgctgatcaagccactgaaacgagtggaggaa
ggaaatggagagtcgggtgagaatggacacatcagaaagaagctgaagtctgtagaaccg
actggcaatgagaggaaacaccccaaaagaaaagtggtcctgcttttggcatattcaggc
aaaggttactacggtatgcagagaaatgctggatcctcccagttcaaaaccattgaggat
gagctggtcacagcactgattaagtctgggtgcatcccagacaaccatggagatgacatg
aaaaaaatgtcgttccaaagatgtgcgagaacagacaagggtgtttctgcagcaggtcaa
gtggtctctctgaaactgtggatgattgaagacgtaatggaaaagatcaactccaatctt
ccaccacagatcagagtgctgggtctgaaacgagtgactgggggcttcaattctaaaaac
agctgtgatgcccgcacatattcctacatgctccccactgtggccttctccccaaaggac
tattacaccaagaattacgctgcgttccgccttgagccagagacactgcagagagtaaac
cagctgtttggcagctacaagggcacccataactttcacaacttcacctcccagaaggcc
gcatgggaccccagcgcccgccgctacatcacagagatgtcctgtggcgagccctttgtt
cgtggcggcgccgagtttgcagagattactgtgcgtggccagagcttcatgatgcatcag
atccggaagatgatcggcctggtgatagctgtggtgaagggctattcgggggacgaagtg
ttaaagcgaagctggggtgaggagaaagtggacgtgcccaaagcccccgggctgggcctg
gtgctggagaaggtgcactttgacaggtacaacaagcggtttggtggggacggcctccat
gagtgcctggagtggactgaagaggagcaggccatcttggctttcaaggaggagcacatc
taccccagcattgtggagacagagtgccaggaagggtccatggctagctggatggccaca
ctgcccatacatgactttgaggcaactgcaacaggagctcaggataaggatagggagcag
gatgatgaggagggtaatagatcagattctgcactttga
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