Salmo salar (Atlantic salmon): 100195740
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Entry
100195740 CDS
T04363
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03030
DNA replication
sasa03410
Base excision repair
sasa03420
Nucleotide excision repair
sasa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100195740 (rfc4)
03410 Base excision repair
100195740 (rfc4)
03420 Nucleotide excision repair
100195740 (rfc4)
03430 Mismatch repair
100195740 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
100195740 (rfc4)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100195740 (rfc4)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100195740 (rfc4)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100195740 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
100195740 (rfc4)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100195740 (rfc4)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100195740 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
100195740 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_22
AAA_assoc_2
AAA_30
AAA_11
Mg_chelatase
DUF815
RuvB_N
AAA_24
SLFN-g3_helicase
AAA_28
AAA_14
AAA_5
Gp44_lid
AAA_19
RPA_interact_N
Cdc6_lid
ResIII
Kinesin
AAA_7
ATPase_2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
100195740
NCBI-ProteinID:
NP_001134241
UniProt:
B5X7D2
LinkDB
All DBs
Position
ssa10:complement(26202094..26209273)
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGTSTQGTRPLKEKGTGTSGEKKQKSVPWVEKYRPKCMEEVAFQEEVVAVLKKTI
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRF
AQLTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLANQVQEERLLDICDKENLKYSKEGIAALVKVSEGDLRKAITFLQ
SAARLNTDNEITESAVIEIAGVVPPKMIDNLLKICYKGTFEKLEIAVRNMVDEGYAATQI
INQLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSLCSVIMQQATE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcaactcaaggcaccagacctctgaaagagaaaggt
acagggaccagtggagagaagaagcagaaatctgtcccctgggtagagaaatatagacca
aaatgtatggaagaggtggcgtttcaagaggaggtggttgctgtgctgaagaagactata
gagggcgctgatctccccaatctactgttctatggaccacctggaacaggaaagacctcc
accatcctggctgcagccagggaactttatgggccagagctgtaccgacagagagtgctg
gagctgaacgcctctgatgagagagggattcaggtggtgagagagaaagtcaagagattt
gcccagctgactgtagcaggccaccgcactgatgggaaaccatgtccaccctttaagatc
atcatcctggatgaggctgactcaatgaccaatgctgctcaggctgctctcagacgcacc
atggagaaggagtcccggaccacccgcttctgtctcatctgcaactacatcagcaggatt
attgagcccttgacatccagatgctccaaattccgcttcaaacctctagcaaatcaggtc
caagaagagcgcctgctggatatctgtgacaaggagaatctcaagtactcaaaggagggt
attgcagcgttggtgaaggtttcagaaggggatcttagaaaagccataacctttcttcaa
agtgctgcacggctgaacacagataatgagatcacggagagtgcggtcatagagatagca
ggggttgttcctcccaagatgattgacaatttgctcaaaatctgttacaagggaacattt
gaaaaactagagattgctgttcggaacatggtagatgagggctatgctgccacacagatc
atcaaccagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgcc
atcacggaaaagatggcagtggttgacaagtgtttagtggatggtgcagatgagtacctg
cagatgctgagtctgtgttctgtgatcatgcagcaagccactgagtaa
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