Salmo salar (Atlantic salmon): 100195741
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Entry
100195741 CDS
T04363
Symbol
tmco1
Name
(RefSeq) transmembrane and coiled-coil domains 1
KO
K21891
calcium load-activated calcium channel
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100195741 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sasa02000
]
100195741 (tmco1)
Membrane trafficking [BR:
sasa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
100195741 (tmco1)
Transporters [BR:
sasa02000
]
Other transporters
Pores ion channels [TC:
1
]
100195741 (tmco1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF4199
DUF2368
DUF6809
DUF5683
Vpu
Exonuc_VII_L
DivIC
DSHCT
DLH
DUF6080
Peptidase_S49_N
Piezo_TM1-24
Nucleoside_tran
ATG14
Motif
Other DBs
NCBI-GeneID:
100195741
NCBI-ProteinID:
NP_001134242
UniProt:
B5X7D4
LinkDB
All DBs
Position
ssa10:40032737..40037315
Genome browser
AA seq
188 aa
AA seq
DB search
MTTMFADTILIVFISVCTALLAEGITWVLVYRTAKYKSLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLLGEDFTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgttcgcagacactattcttattgtgttcatatctgtttgcacagctctg
ttagctgagggaattacatgggtgttggtgtatcgtactgcaaagtacaagagtctgaag
gcagaggtggaaaagcaaagcaagaaattggagaagaagaaggaaaccattacagaatct
gcaggacgtcaacagaagaaaaagattgagagacaagaggagaaactgaagaacaacaac
agagatctatccatggtacgaatgaagtccatgttcgccattggcttctgtttcacagcg
ttgatgggaatgttcaactccatctttgatggaagggttgtggcaaaactgccattcgtc
ccactgtcctacattcagggcctttcccatcgcaaccttttgggcgaggacttcactgac
tgctccttcatcttcttgtacattctctgcaccatgtccatcagacagaacatccagaag
atgctcggtctggccccctccagagctgccaccaagcaggctggaggttttttgggaccc
cctccccaggcagctaagttctcctaa
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