Salmo salar (Atlantic salmon): 100195803
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Entry
100195803 CDS
T04363
Symbol
exos4
Name
(RefSeq) Exosome complex exonuclease RRP41
KO
K11600
exosome complex component RRP41
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100195803 (exos4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100195803 (exos4)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100195803 (exos4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
100195803 (exos4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100195803
NCBI-ProteinID:
NP_001134304
UniProt:
B5X813
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All DBs
Position
ssa03:complement(29865619..29867612)
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG
SRSKTLHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVLTNLYPRSQ
IDIYVKILQSDGGNYSACVNAATLAVVDAGIPMRDYVCACTAGFVDETPLADLCHAEESG
GGTSLALALLPRGGHIALLQMDARLHQDHLETLMEAAMTACKGVSKVLDEVVRQHLQVVS
ALTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctggaattattgtcagatcaaggatatcgtcttgatggaagaaaagctgct
gaactgcggaaagtacaagctcgtatgggtgtatttgcccaagctgacgggtctgcgtac
atagaacagggaaataccaaagcgctggcagttgtgtatggtcctcatgaagtgcgaggc
tcccgcagcaagaccctccatgaccgtgctgtcatcaactgccaatacagcatggcgacc
ttcagtacagcggagaggaagagaagaccccatggggatcgcaagtccacagagatgagc
cttcacctcaagcagactttcgaggcagcggtgttgactaatctgtacccacgctctcaa
atagacatttatgtcaagatcttgcagtcagatggagggaactacagcgcgtgtgtgaac
gccgccactctggcagtagtcgatgcgggcatccccatgcgtgactatgtgtgcgcctgc
actgcgggctttgtggatgagaccccattggcagacctgtgccatgctgaagagagtgga
gggggcacatcactggccctggcattgttgccccgtggcgggcacatcgccctgctacag
atggacgcccgactccaccaggaccacctagagacactgatggaggcggcaatgacggcc
tgtaagggcgtcagcaaagtgttggacgaggtggtgaggcagcatctacaggtggtgtct
gcgctgactggagagtga
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