Salmo salar (Atlantic salmon): 100195855
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Entry
100195855 CDS
T04363
Symbol
brcc3, brcc36
Name
(RefSeq) BRCA1/BRCA2-containing complex subunit 3
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03440
Homologous recombination
sasa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100195855 (brcc3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100195855 (brcc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
100195855 (brcc3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
100195855 (brcc3)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100195855 (brcc3)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100195855 (brcc3)
Peptidases and inhibitors [BR:
sasa01002
]
Metallo peptidases
Family M67
100195855 (brcc3)
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100195855 (brcc3)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
100195855 (brcc3)
BRISC complex
100195855 (brcc3)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
100195855 (brcc3)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100195855 (brcc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
REP_ORF2-G2P
DUF7385
Motif
Other DBs
NCBI-GeneID:
100195855
NCBI-ProteinID:
NP_001134356
UniProt:
B5X8M4
A0A1S2X2R6
LinkDB
All DBs
Position
ssa11:complement(75065759..75070562)
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AA seq
260 aa
AA seq
DB search
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRKIHSLTHLDPITKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNR
QSVIELQLEKERLTQELATM
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaagcgcagttcacctcgaatcagatgcctttttggtttgcatgaatcatgca
ttaagtaccgagaaggaggaagtaatgggactctgcatcggagaggtggacaccaaccgc
atcgtccacattcattctgttattattctccggcgctcagacaagaggaaggatcgcgtg
gaaatctcgcctgagcagctatcttcagcggctaccgaagctgagaggttggctgaaatg
actggacggccgatgcgtgtagttggttggtaccactctcacccccacatcactgtgtgg
ccatcacatgtggatgtaagaacacaggccatgtaccaaatgatggaccagggctttgtt
gggctgatattctcctgtttcattgaggataagaacacaaaaactggtcgagttctctac
acctgcttccagtctgtgcaagcccagaaaggctctgagtacgagagaatcgagatccca
attcatgtggtcccgcacgaggccattgggaaagtgtgccttgaatcagcagtggagctc
ccaagaatcctctgccaggaagagcaggatacctacagaaagattcacagcttaactcac
ctggatccgatcacgaagatacacaatggctcagtgttcactaagaacctgtgcagtcag
atgtctgctgtgagtggtcccctgctgcagtggctggaggaccgtttggagcagaacaga
cagagtgttattgagctgcagctggagaaggagagactaactcaggagctggcaaccatg
tga
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