Salmo salar (Atlantic salmon): 100195946
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Entry
100195946 CDS
T04363
Symbol
rae1, rae1l
Name
(RefSeq) ribonucleic acid export 1
KO
K14298
mRNA export factor
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100195946 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100195946 (rae1)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100195946 (rae1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100195946 (rae1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100195946 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
100195946
NCBI-ProteinID:
NP_001134447
UniProt:
B5X9N9
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All DBs
Position
ssa13:21948038..21952951
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AA seq
365 aa
AA seq
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MSLFGGSTGFGAGGFGAATTDTHNPMKDVEVTSPPDDSISCLAFSPPAMPGNFLIGGSWA
NDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSEDGSKVFTASCDKTAKMWDLNSNQAIQI
AQHDAPIRTVHWIKAPNYNCIMTGSWDKTLKFWDTRSPNPMMSLQLPERCYCADVVYPMA
VVASADRGLIVYQLENQPSEFRRIDSPLKHQHRCIAIFKDKQNKPAGFALGSIEGRVAIH
YINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKD
ARTKLKTSEQLDQPITACSFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNATEELK
PRNKK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttcgggggcagcactggctttggcgctgggggatttggagcggcaaccacg
gacacccacaacccaatgaaggatgtagaagtaacctcacccccagatgacagcatcagt
tgcttggcgttcagtccccctgccatgccagggaacttcttgatagggggatcctgggcc
aatgatgtgagatgttgggaggtacaggacaacgggcagacagtccccaaagcccagcag
atgcacacaggtcccgtccttgatgtctgctggagcgaagacggtagcaaggttttcaca
gcgtcttgtgacaagactgccaaaatgtgggacctcaacagcaaccaggcaatacagatc
gcacagcatgatgctcctatcagaacagtccactggatcaaagcccccaactacaactgc
atcatgacaggcagctgggacaaaactctgaagttctgggacacccgctcgcccaaccca
atgatgtctctgcagttgccagagaggtgctactgtgcagacgtggtgtaccccatggca
gtggtagcgtctgcagaccgaggtttgattgtatatcagcttgaaaaccagccgtctgag
tttaggaggatagactcaccactcaaacaccagcaccgctgcatagccatttttaaggac
aaacagaacaagcctgctggatttgctctcggaagcattgaagggcgggtcgccattcac
tacatcaaccctcctaacccagccaaggataacttcacctttaagtgccacaggtcgaat
ggaaccaatacagccacaccacaagatatctatgctgtaaatgccatctccttccaccct
gtccacgggacactggcaactgttgggtcggatggtcgcttcagcttctgggataaagac
gcccgcaccaagctgaagacctcagagcagctggaccagccaatcacagcatgctccttc
aacaacaacggcaacatctttgcctacgcctccagctatgattggtcaaagggacatgag
tactacaatcctcagaaaaagaactacatcttcctgcgtaatgctactgaggagctgaaa
ccacggaacaagaaatga
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