KEGG   Salmo salar (Atlantic salmon): 100195946
Entry
100195946         CDS       T04363                                 
Symbol
rae1, rae1l
Name
(RefSeq) ribonucleic acid export 1
  KO
K14298  mRNA export factor
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100195946 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100195946 (rae1)
   03036 Chromosome and associated proteins [BR:sasa03036]
    100195946 (rae1)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100195946 (rae1)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100195946 (rae1)
SSDB
Motif
Pfam: WD40 WDR55 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT140_1st eIF2A Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_SPT8 Exonuc_X-T_C
Other DBs
NCBI-GeneID: 100195946
NCBI-ProteinID: NP_001134447
UniProt: B5X9N9
LinkDB
Position
ssa13:21948038..21952951
AA seq 365 aa
MSLFGGSTGFGAGGFGAATTDTHNPMKDVEVTSPPDDSISCLAFSPPAMPGNFLIGGSWA
NDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSEDGSKVFTASCDKTAKMWDLNSNQAIQI
AQHDAPIRTVHWIKAPNYNCIMTGSWDKTLKFWDTRSPNPMMSLQLPERCYCADVVYPMA
VVASADRGLIVYQLENQPSEFRRIDSPLKHQHRCIAIFKDKQNKPAGFALGSIEGRVAIH
YINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKD
ARTKLKTSEQLDQPITACSFNNNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNATEELK
PRNKK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgagtttgttcgggggcagcactggctttggcgctgggggatttggagcggcaaccacg
gacacccacaacccaatgaaggatgtagaagtaacctcacccccagatgacagcatcagt
tgcttggcgttcagtccccctgccatgccagggaacttcttgatagggggatcctgggcc
aatgatgtgagatgttgggaggtacaggacaacgggcagacagtccccaaagcccagcag
atgcacacaggtcccgtccttgatgtctgctggagcgaagacggtagcaaggttttcaca
gcgtcttgtgacaagactgccaaaatgtgggacctcaacagcaaccaggcaatacagatc
gcacagcatgatgctcctatcagaacagtccactggatcaaagcccccaactacaactgc
atcatgacaggcagctgggacaaaactctgaagttctgggacacccgctcgcccaaccca
atgatgtctctgcagttgccagagaggtgctactgtgcagacgtggtgtaccccatggca
gtggtagcgtctgcagaccgaggtttgattgtatatcagcttgaaaaccagccgtctgag
tttaggaggatagactcaccactcaaacaccagcaccgctgcatagccatttttaaggac
aaacagaacaagcctgctggatttgctctcggaagcattgaagggcgggtcgccattcac
tacatcaaccctcctaacccagccaaggataacttcacctttaagtgccacaggtcgaat
ggaaccaatacagccacaccacaagatatctatgctgtaaatgccatctccttccaccct
gtccacgggacactggcaactgttgggtcggatggtcgcttcagcttctgggataaagac
gcccgcaccaagctgaagacctcagagcagctggaccagccaatcacagcatgctccttc
aacaacaacggcaacatctttgcctacgcctccagctatgattggtcaaagggacatgag
tactacaatcctcagaaaaagaactacatcttcctgcgtaatgctactgaggagctgaaa
ccacggaacaagaaatga

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