KEGG   Salmo salar (Atlantic salmon): 100195964
Entry
100195964         CDS       T04363                                 
Symbol
utp13
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100195964 (utp13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sasa03009]
    100195964 (utp13)
Ribosome biogenesis [BR:sasa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100195964 (utp13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Utp13 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st PEP5_VPS11_N Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_Vps41 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 100195964
NCBI-ProteinID: XP_014058443
UniProt: A0A1S3S204
LinkDB
Position
ssa06:16298937..16338683
AA seq 798 aa
MAKSNLQFKTNYAVSSTIEPFYKGGKVQISKDEKFIFCTCGTRVNVLQIVTGKIVHSIEQ
DDQEDITSFALSLDDEILVTASKALLLKQWDWKQAQCTRSWRAIHNVPVASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISLLQLFSSASDCGIRMWDLR
SSQCLCVLQSHYSPVTSLAFTSDGASMVSSGRDKICTVWDLKSRTARRTVPVYEAVESVV
LLPEDEDFSEIGVKTKEIHFITAGSKGVLRVWDASSARCVFAQTLPSAPPARGSEEGGEE
YGDPRSLTYCLPLPSSLRLATVTAEHNILLYQLPSFTAQQQFVGFNDEVLDVKFLGKGDT
HIVVATNSSQLKVFDLATSSCKILYGHTDTVLSLDVFKKGSLFVSCAKDKSVRVWRQDPD
SGQVCCVAHGCSHGNAVGSITCSRMKESFVVSGSQDCTIKVWDLPETIPETDGDMFQLTA
RVTEKAHDKDVNSVAVSPNDKLLVSGSQDRLAKLWSLGPPGADLALLGVFRGHRRGVWCV
QFSPMDQVLASSSADGSVKLWSLQDFSCLKTFEGHDASVLKLIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHATRKDDRVVTASADSNITVWTDVTEVEQAEEQAKQ
EDQILKKQELSNLLHEKKFLKALGLAISLDQPHTVLKVIKAIRQGEDGAKQLEKTVLKLR
QDQKESMLRYCAVWNTNARSCLDAQAVIQVMLTHLSPEELLQYQGARAHLEGLIPYTGEV
GRIREEADDIRIPIRPTP
NT seq 2397 nt   +upstreamnt  +downstreamnt
atggcaaaaagcaatctccagttcaaaaccaactatgctgtttccagcaccatcgaacca
ttctacaagggaggaaaagtacagatcagtaaagatgagaaattcatattttgtacgtgt
ggcacacgtgtcaacgtcttgcaaatcgttacagggaagattgttcacagtattgaacag
gatgatcaggaggacattacatcattcgccctcagccttgatgatgagatcctggtaaca
gccagcaaggctctgctgctgaagcaatgggactggaagcaggcccagtgcacacgctcc
tggagggccatccacaatgtgcctgttgccagcatgacctttgaccccacctccacgctc
ctggccacaggaggctgtgatggcaccataaagctgtgggacgtggtgaagcagtactgt
acacacaacctgaagggctcctctggggtcgtacacctggtggagttccacccagacata
agtctactgcagctcttctcctcggcgtcagactgtggcatcaggatgtgggacctgcgc
tccagccagtgtctgtgcgtgctgcagagccactacagccctgtcacctccctggccttc
acctccgatggagcctccatggtcagctctggcagggacaagatctgcacagtgtgggat
ctgaagagcaggactgccaggaggacagtgcccgtctatgaggctgtggagagtgttgtg
ctgctccctgaggacgaagatttctctgagatcggggtgaaaactaaagagatccacttc
atcacagcaggcagcaaaggtgtgctgagggtgtgggatgccagctcggcccgctgtgtg
ttcgcccagacgctcccctctgctccccccgcgcggggctctgaggaggggggggaggag
tatggagacccccggagcctcacctactgcctccccctgccctcctccctcaggctggcc
acggtcacagcagaacataacatcctgctctaccagctgccctccttcaccgcacagcaa
cagtttgttggcttcaatgacgaggtcctggatgtgaagtttctgggaaagggtgacact
cacattgtcgtggcgaccaacagctcccagctcaaggtgtttgacctggctaccagcagc
tgtaagatcctctacggacacacagataccgtcctgtcactcgacgtgttcaagaaagga
tccctgtttgtgagctgtgcaaaggataagtcagtgcgtgtgtggagacaggatccagac
agtggtcaggtgtgttgtgtggcccacggctgcagccatggtaacgctgtgggctccatc
acctgctccaggatgaaggagtcgtttgtggtgtctggtagtcaggactgcaccatcaag
gtgtgggatctcccagagaccatcccggaaacagacggtgacatgttccagctgaccgcc
cgggtcacagagaaggcacacgacaaagatgtgaacagcgtggcagtttcccctaacgac
aagctcttggtgtctggttcccaggaccgcctggccaagctgtggtccctggggcccccc
ggggccgacctggccctgctgggggtgttccggggccaccgccggggggtctggtgtgtc
cagttctctcccatggaccaggtgctggcatcctcctcagccgacggctctgtcaagctc
tggagcctccaggacttcagctgcctcaagacgtttgaaggccacgatgcctctgtgctg
aagctcatctttgtgagcagagggactcagctactcacaagtgggtcagatgggctggtc
aagctgtggaccatcaagaccaatgagtgtgtgaagacgctggatgcccaccaggacaag
gtgtggggtctccacgccaccaggaaggacgaccgcgttgtcaccgcctcggccgactcc
aacatcactgtgtggacggacgtgacagaggtggagcaggcagaggagcaggcgaagcag
gaagaccagatactcaagaaacaggagctgtctaacctgcttcatgagaagaagttcctg
aaggctctgggcctggccatctccctggaccagccacacactgtgctcaaagtcattaaa
gcgatccgccagggggaagatggtgctaagcagctggagaagactgtgctgaagctgcgc
caggaccagaaagagtctatgctgcgctactgtgctgtgtggaacaccaacgcccggagc
tgtctggacgcccaggctgtgatccaggtgatgctcacacacctctcccctgaagagctg
ctccagtaccaaggagcacgcgcacacctggagggactcataccttacactggtgaggtg
gggaggattagggaggaagccgatgacatccgaattcccatcagaccaactccttga

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