Salmo salar (Atlantic salmon): 100195964
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Entry
100195964 CDS
T04363
Symbol
utp13
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100195964 (utp13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sasa03009
]
100195964 (utp13)
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100195964 (utp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Utp13
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_NWD2_C
WD40_RFWD3
Beta-prop_Vps41
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
100195964
NCBI-ProteinID:
XP_014058443
UniProt:
A0A1S3S204
LinkDB
All DBs
Position
ssa06:16298937..16338683
Genome browser
AA seq
798 aa
AA seq
DB search
MAKSNLQFKTNYAVSSTIEPFYKGGKVQISKDEKFIFCTCGTRVNVLQIVTGKIVHSIEQ
DDQEDITSFALSLDDEILVTASKALLLKQWDWKQAQCTRSWRAIHNVPVASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSSGVVHLVEFHPDISLLQLFSSASDCGIRMWDLR
SSQCLCVLQSHYSPVTSLAFTSDGASMVSSGRDKICTVWDLKSRTARRTVPVYEAVESVV
LLPEDEDFSEIGVKTKEIHFITAGSKGVLRVWDASSARCVFAQTLPSAPPARGSEEGGEE
YGDPRSLTYCLPLPSSLRLATVTAEHNILLYQLPSFTAQQQFVGFNDEVLDVKFLGKGDT
HIVVATNSSQLKVFDLATSSCKILYGHTDTVLSLDVFKKGSLFVSCAKDKSVRVWRQDPD
SGQVCCVAHGCSHGNAVGSITCSRMKESFVVSGSQDCTIKVWDLPETIPETDGDMFQLTA
RVTEKAHDKDVNSVAVSPNDKLLVSGSQDRLAKLWSLGPPGADLALLGVFRGHRRGVWCV
QFSPMDQVLASSSADGSVKLWSLQDFSCLKTFEGHDASVLKLIFVSRGTQLLTSGSDGLV
KLWTIKTNECVKTLDAHQDKVWGLHATRKDDRVVTASADSNITVWTDVTEVEQAEEQAKQ
EDQILKKQELSNLLHEKKFLKALGLAISLDQPHTVLKVIKAIRQGEDGAKQLEKTVLKLR
QDQKESMLRYCAVWNTNARSCLDAQAVIQVMLTHLSPEELLQYQGARAHLEGLIPYTGEV
GRIREEADDIRIPIRPTP
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaagcaatctccagttcaaaaccaactatgctgtttccagcaccatcgaacca
ttctacaagggaggaaaagtacagatcagtaaagatgagaaattcatattttgtacgtgt
ggcacacgtgtcaacgtcttgcaaatcgttacagggaagattgttcacagtattgaacag
gatgatcaggaggacattacatcattcgccctcagccttgatgatgagatcctggtaaca
gccagcaaggctctgctgctgaagcaatgggactggaagcaggcccagtgcacacgctcc
tggagggccatccacaatgtgcctgttgccagcatgacctttgaccccacctccacgctc
ctggccacaggaggctgtgatggcaccataaagctgtgggacgtggtgaagcagtactgt
acacacaacctgaagggctcctctggggtcgtacacctggtggagttccacccagacata
agtctactgcagctcttctcctcggcgtcagactgtggcatcaggatgtgggacctgcgc
tccagccagtgtctgtgcgtgctgcagagccactacagccctgtcacctccctggccttc
acctccgatggagcctccatggtcagctctggcagggacaagatctgcacagtgtgggat
ctgaagagcaggactgccaggaggacagtgcccgtctatgaggctgtggagagtgttgtg
ctgctccctgaggacgaagatttctctgagatcggggtgaaaactaaagagatccacttc
atcacagcaggcagcaaaggtgtgctgagggtgtgggatgccagctcggcccgctgtgtg
ttcgcccagacgctcccctctgctccccccgcgcggggctctgaggaggggggggaggag
tatggagacccccggagcctcacctactgcctccccctgccctcctccctcaggctggcc
acggtcacagcagaacataacatcctgctctaccagctgccctccttcaccgcacagcaa
cagtttgttggcttcaatgacgaggtcctggatgtgaagtttctgggaaagggtgacact
cacattgtcgtggcgaccaacagctcccagctcaaggtgtttgacctggctaccagcagc
tgtaagatcctctacggacacacagataccgtcctgtcactcgacgtgttcaagaaagga
tccctgtttgtgagctgtgcaaaggataagtcagtgcgtgtgtggagacaggatccagac
agtggtcaggtgtgttgtgtggcccacggctgcagccatggtaacgctgtgggctccatc
acctgctccaggatgaaggagtcgtttgtggtgtctggtagtcaggactgcaccatcaag
gtgtgggatctcccagagaccatcccggaaacagacggtgacatgttccagctgaccgcc
cgggtcacagagaaggcacacgacaaagatgtgaacagcgtggcagtttcccctaacgac
aagctcttggtgtctggttcccaggaccgcctggccaagctgtggtccctggggcccccc
ggggccgacctggccctgctgggggtgttccggggccaccgccggggggtctggtgtgtc
cagttctctcccatggaccaggtgctggcatcctcctcagccgacggctctgtcaagctc
tggagcctccaggacttcagctgcctcaagacgtttgaaggccacgatgcctctgtgctg
aagctcatctttgtgagcagagggactcagctactcacaagtgggtcagatgggctggtc
aagctgtggaccatcaagaccaatgagtgtgtgaagacgctggatgcccaccaggacaag
gtgtggggtctccacgccaccaggaaggacgaccgcgttgtcaccgcctcggccgactcc
aacatcactgtgtggacggacgtgacagaggtggagcaggcagaggagcaggcgaagcag
gaagaccagatactcaagaaacaggagctgtctaacctgcttcatgagaagaagttcctg
aaggctctgggcctggccatctccctggaccagccacacactgtgctcaaagtcattaaa
gcgatccgccagggggaagatggtgctaagcagctggagaagactgtgctgaagctgcgc
caggaccagaaagagtctatgctgcgctactgtgctgtgtggaacaccaacgcccggagc
tgtctggacgcccaggctgtgatccaggtgatgctcacacacctctcccctgaagagctg
ctccagtaccaaggagcacgcgcacacctggagggactcataccttacactggtgaggtg
gggaggattagggaggaagccgatgacatccgaattcccatcagaccaactccttga
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