Salmo salar (Atlantic salmon): 100195993
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Entry
100195993 CDS
T04363
Symbol
stx1b
Name
(RefSeq) syntaxin 1B
KO
K08486
syntaxin 1B/2/3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100195993 (stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100195993 (stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100195993 (stx1b)
Membrane trafficking [BR:
sasa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100195993 (stx1b)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100195993 (stx1b)
Exosomal proteins of other body fluids (saliva and urine)
100195993 (stx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
Spectrin_Anc-1
VBS_C3G9
Lzipper-MIP1
Lge1
YtxH
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
100195993
NCBI-ProteinID:
NP_001134494
UniProt:
B5XA81
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All DBs
Position
ssa06:complement(39958784..40013387)
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AA seq
288 aa
AA seq
DB search
MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgaccgggatcatttcatggatgagttctttgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgatgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgaacagagcattgag
caggaggaggggctgaacagatcatctgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgatatc
aagatggactctcagatagacaagcaggccctgaatgagattgagacccgacacaccgag
atcatcaagctggagaacagcatccgtgagctgcacgacatgtttgtagacatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactattctgggagttgtcttggcgtcc
actatcggcggatacctgggcttttaa
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integrated database retrieval system
