Salmo salar (Atlantic salmon): 100196073
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Entry
100196073 CDS
T04363
Symbol
sptlc2, lcb2
Name
(RefSeq) serine palmitoyltransferase long chain base subunit 2
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00600
Sphingolipid metabolism
sasa01100
Metabolic pathways
Module
sasa_M00094
Ceramide biosynthesis
sasa_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100196073 (sptlc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sasa01007
]
100196073 (sptlc2)
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
100196073 (sptlc2)
Amino acid related enzymes [BR:
sasa01007
]
Aminotransferase (transaminase)
Class II
100196073 (sptlc2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
100196073
NCBI-ProteinID:
XP_014051594
UniProt:
A0A1S3RII6
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Position
ssa01:43993726..44042565
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AA seq
558 aa
AA seq
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MTESSANKPANGQVCHRVKNGVKPGRNGFIKNHHHYHHQQPMYCYPEDKVQHTACNGSSS
LGLYSRPFIESFEETPMLVAVLTYMGYGILTIFGYLRDFLRDWKIERCHIAREREEQRDF
VPLYQDFENFYTRNLYMRIRDSWNRPICSVPGAKVDLVERVSPDYNWTFDYTGKVVEGVI
NMGSYNYLGFAENTGYCADASAEVTMKYGVGVASTRQEMGNLDRHEEMEELVAKFLGVES
AMAFGMGFATNSMNIPALTGKGCLILSDELNHASLVLGARLSGSTIRVFKHNNMQSLEKM
LRDAIVHGQPRTHRPWKKILILVEGIYSMEGSIVRLPEVIALKKRYRAYLYLDEAHSIGA
LGPGGRGVVDYFGLDPRDVDVMMGTFTKSFGAAGGYIGGRKELMEYLRSHSHSAVYAASM
SPPVVEQIIASMKCIMGEDGTTLGRDRVQQLAENTLYFRRRLTEMGFIIYGNNDSPVVPM
MLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCISAAHTKDMLDTALSVISEV
GDLLQVKYSRQKRLPSLD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaagctccgcgaacaagccggcgaatggacaagtttgtcaccgagtgaagaac
ggcgttaaaccgggcaggaacggcttcataaaaaaccatcaccactaccatcatcagcag
ccgatgtactgctatcccgaggacaaggtacagcacacagcgtgtaatggcagcagcagc
ctgggcctgtacagtcgtcccttcatcgagtcttttgaggaaacgcccatgctggtggcg
gtcctcacctacatgggctacggcatcctcaccatcttcggatacctccgagacttcctc
cgggactggaagatcgagaggtgtcacattgcccgcgaaagggaggagcagagggacttt
gtcccactttaccaggactttgagaacttttacaccaggaacttatacatgcggatccgt
gacagttggaaccgacccatctgcagtgtcccgggggccaaggtggacctggtggaacgt
gtgtcacctgattacaactggacctttgactacacaggcaaagtggttgaaggtgtaata
aacatgggttcctataactacctgggctttgctgagaacacgggttactgtgctgacgcg
tccgctgaggtcaccatgaagtacggggtgggcgtggccagcaccaggcaggagatgggt
aacttagacagacatgaggagatggaggagctggttgctaaattcctgggcgtggagtcg
gccatggctttcgggatgggcttcgctaccaattcgatgaacatccctgcccttactggc
aagggctgtctaatcctaagtgatgagctgaaccatgcctctctggtcctgggagccagg
ctgtctgggtccaccatccgtgtcttcaaacacaacaacatgcaaagtctggagaagatg
ttgagagacgccatagtccacggccagcccagaacacacaggccatggaagaagatcctc
atactggtggagggaatatacagtatggaaggcagtatagtacgtctacctgaagtcata
gctctgaagaagcgctacagggcctatctgtacctggacgaggcccacagtattggggct
ttggggccagggggccgaggtgtagtcgactactttggtctggacccccgggacgtggac
gtcatgatggggacgttcaccaagagcttcggcgccgctgggggctacatcggaggcagg
aaggagttgatggagtacctgcgttcccactctcacagtgcggtgtacgccgcgtccatg
tcacctcctgtcgtagagcagatcatcgcttctatgaagtgcattatgggggaggacggg
acaacgctaggtcgtgatcgcgtgcagcagttggcagagaacactttgtatttccgtcgg
agactgacagagatgggctttatcatctacggaaacaacgactcgcccgttgttcccatg
atgctctacatgccggccaagataggggcgtttggtagagagatgctgaagaggaacatc
ggggtggtggtggtgggctttccagccacacccatcattgagtccagagcacgattctgt
atctctgccgctcacaccaaagacatgctcgacacggccctgagtgtgatcagtgaggta
ggagacctgctgcaggtcaagtactccagacagaagagactgccctctctcgactga
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