Salmo salar (Atlantic salmon): 100196114
Help
Entry
100196114 CDS
T04363
Symbol
ro32
Name
(RefSeq) Heterogeneous nuclear ribonucleoprotein A3 homolog 2
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100196114 (ro32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196114 (ro32)
03041 Spliceosome [BR:
sasa03041
]
100196114 (ro32)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100196114 (ro32)
mRNA cycle factors
Common to processing body (P body) and stress granule
100196114 (ro32)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
hnRNP proteins
100196114 (ro32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
OB_RNB
RRM_3
PHM7_cyt
Kp4
Lipl32
Motif
Other DBs
NCBI-GeneID:
100196114
NCBI-ProteinID:
NP_001134615
UniProt:
B5XBH7
LinkDB
All DBs
Position
ssa25:15214986..15218657
Genome browser
AA seq
339 aa
AA seq
DB search
MEGHEAREPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVT
YSCVEEVDACMAARPHKVDGRVVEPKRAVSREDSNRPGAHLTVKKIFVGGIKEDTREDHI
REYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINSHNCEVRKAL
PKQEMEASNQRNRGGGSGNFMGRGGNSGGGNFGQGGYGGGRGGDGYNGYGGEGGNYSGGP
GYRGGRGGGYGGGSPGYGNQGGGFGGGYDNYNDRGNFRGNFGGGRGGNYNDFGNYGGPQS
SYGPMKGNNFGGRNSGGGPYGGGYGSGGGSGHGYGSQRY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcatgaagctagggagcctgaacagctcaggaagctgttcattgggggccta
agttttgaaaccactgaggaaagtttaaggatccattttgaacaatggggaaacctcaca
gacagtgtggtaatgcgggacccaaacaacaagcgctcgagagggttcggctttgtaaca
tactcctgtgtggaggaggtggatgcctgcatggcagctcgccctcataaggtggacgga
cgtgttgttgaacctaaaagggctgtatcgagagaggactctaatagaccgggtgcccac
ctgacggtgaagaagatatttgttggggggatcaaggaggacacacgggaggaccatatc
agggagtactttgagacctacgggaggattgagaccattgacattatggaggaacgcgca
actgggaaaaagaggggattctgctttgtctcatttgatgacaatgacactgtggataaa
attgttgctcagaaataccacacaataaacagccacaactgcgaagtcagaaaagcactc
ccaaaacaggaaatggaggcgtctaatcagaggaataggggtggtggctctggaaacttc
atgggcagaggtggcaactctggtggtggcaactttgggcaaggaggctacggtggcgga
agaggaggggatggatacaatggatacggtggagagggtggaaactacagtgggggacct
ggctacagaggtggacgtggtggcgggtatgggggaggaagtcctgggtatggaaaccag
ggaggaggctttggaggaggatatgataactacaatgacagaggcaactttagagggaac
tttggtggtggaaggggtggaaattacaatgactttggcaactacggaggaccgcaatct
agctatggtcccatgaaggggaacaactttggtggcagaaactctggtggtggcccctat
ggaggtggctacggctcaggcggtggaagtgggcatggctacggctcacagcgatattga
DBGET
integrated database retrieval system
