Salmo salar (Atlantic salmon): 100196241
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Entry
100196241 CDS
T04363
Symbol
snrpa
Name
(RefSeq) small nuclear ribonucleoprotein polypeptide A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100196241 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
100196241 (snrpa)
Spliceosome [BR:
sasa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100196241 (snrpa)
Complex B
100196241 (snrpa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
100196241
NCBI-ProteinID:
NP_001134742
UniProt:
B5XCU4
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Position
ssa09:99225205..99227873
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AA seq
281 aa
AA seq
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MAAPDMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARSLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIGYAKGDSDIIAKMKGTYVERDRKKEKRAKVKGPEAA
GAKKGVPGTPVVPMGPGVPTAMPGMPPMSGAPRMMQMPGQPPYMPPPGMMPPPGMGPGGM
PPGAMPPGGMMPGQMPHAQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP
GRHDIAFVEFDNDVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggatatgcgtctcaaccacaccatatacatcaacaacctaaacgagaag
attaaaaaagatgaactgaagaagtcgttgtacgccattttctctcagtttggtcaaatc
ctagacattttggttgcccgctcactgaagatgaggggtcaggccttcgtcatcttcaag
gaggtcaacagcgcctccaatgccctgcgttccatgcaggggttcccattctatgacaaa
ccaatgcgtattgggtatgccaaaggggattctgacatcatcgctaaaatgaagggcacc
tacgtggagcgtgaccgtaagaaggagaagagggccaaggtcaagggcccagaggctgca
ggggccaagaagggtgtgccaggaacccctgtagtacctatgggccctggagttccaaca
gccatgcctggaatgccacccatgagcggggctcctcgtatgatgcaaatgccagggcag
cccccttacatgcccccgccaggcatgatgccacctcctgggatgggccctggggggatg
ccccctggtgccatgcctccgggtgggatgatgccaggtcaaatgccccacgcccaggtt
gcagaaaaccctcccaaccacatccttttcctcaccaacctcccagaggagaccaacgag
ctcatgctgtctatgctcttcaaccagttccctgggttcaaagaggtgcgtctggtacct
ggtcgccacgacatcgcctttgtagagtttgataatgacgtgcaggctggagcggccagg
gaggcactacagggcttcaagatcacccagaccaatgccatgaagatctcattcgccaag
aaataa
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