Salmo salar (Atlantic salmon): 100196252
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Entry
100196252 CDS
T04363
Symbol
vps25
Name
(RefSeq) vacuolar protein sorting 25 homolog
KO
K12189
ESCRT-II complex subunit VPS25
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100196252 (vps25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
100196252 (vps25)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
100196252 (vps25)
Membrane trafficking [BR:
sasa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
100196252 (vps25)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100196252 (vps25)
Exosomal proteins of colorectal cancer cells
100196252 (vps25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
DUF2555
Motif
Other DBs
NCBI-GeneID:
100196252
NCBI-ProteinID:
NP_001134753
UniProt:
B5XCZ9
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All DBs
Position
ssa28:complement(19119950..19123564)
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AA seq
174 aa
AA seq
DB search
MSFEWPWQYNFPPFFTLQPNVDTRQKQLAAWCSLALSYCRHHKLYTLDIMEAQESPVFNH
KNIDRKLSMEAILIVFEELRKKGNLEWLDKNKTRCLVMWRRPEEWGKLIYQWVSKNGMVN
TVFTLYELANGDDTESEEFHGLEDWMLIRSLQALQMDGKAEVISMDDGKGVKFF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgagtggccctggcaatataattttcctccgttttttacgttacagcccaat
gttgacaccagacagaaacagcttgcagcttggtgctccctcgcactgtcctactgccgc
catcacaagctctacactctggacatcatggaagcccaagagagccctgtgttcaaccac
aagaatattgatagaaaactatcaatggaggccatactaattgtttttgaggaattgagg
aaaaaagggaacctggaatggttagacaagaacaagacgcggtgtctagtcatgtggagg
aggccagaggaatgggggaaactgatttaccagtgggtctctaaaaacggtatggtcaat
acagtgtttacactctacgagctcgccaacggtgacgacacagaaagcgaagaattccat
gggctggaagactggatgctgattcgttcgctgcaggccctgcagatggacggcaaggca
gaggtcatctccatggatgacgggaagggggtcaagttcttctga
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