Salmo salar (Atlantic salmon): 100196268
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Entry
100196268 CDS
T04363
Symbol
tf2b
Name
(RefSeq) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100196268 (tf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100196268 (tf2b)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
100196268 (tf2b)
Prokaryotic type
Archaeal type
TFB
100196268 (tf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
100196268
NCBI-ProteinID:
NP_001134769
UniProt:
B5XD83
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All DBs
Position
ssa03:complement(12220803..12233266)
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AA seq
318 aa
AA seq
DB search
MASTSRGDVLALPKVQCPNHPDAMLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNE
KATQDPSRVGDAQNPLLNGGDLSTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAD
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgcggagatgtcctggcccttcccaaggtgcagtgccccaaccac
ccagatgccatgctggtggaagactacagagcaggggacatgatctgccccgagtgtggc
cttgtagtgggtgacagggtgattgatgtgggttcagagtggaggaccttcaccaatgag
aaagccacccaagacccgtccagagtgggcgacgcccagaatccactcctcaacggtgga
gacttgagcaccatgatcagcaagggaacaggcgcggcaagttttgacgagttcggcaac
tccaagtatcagaaccggcggaccatgagcagttcagaccgcgccatgctaaacgccttc
aaagagattaccaccatggctgaccggatcaacctaccgaggaacatcatagaccgaaca
aataacttatttaagcaagtgtatgaacagaagagcctgaaggggcgggccaacgacgcc
atcgcatcagcctgcctctacatcgcctgcagacaagagggtgtgcctcggacatttaaa
gagatctgcgctgtgtcccgtatctccaagaaggagattggccgctgcttcaagctgatc
ctcaaggccctggagaccagcgtggacctcatcaccaccggagacttcatgtcccgcttc
tgctccaacctgggtctgcctaagcaggtgcagatggcggccacctacatcgcccggaag
gccgtggagctggacctggtgcccggcaggagccccatttctgtggctgccgccgccatc
tacatggcctctcaggcctccgccgagaagaagacccagaaagagattggagacatcgcc
ggtgtggcggacgtcacaatcagacagtcgtacagactcatctacccccgcgctgccgac
ctctttcccccagacttcaaattcgacacccccgtggacaaactgccccagctgtga
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