Salmo salar (Atlantic salmon): 100196301
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Entry
100196301 CDS
T04363
Symbol
ncbp2, CBP20
Name
(RefSeq) nuclear cap binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100196301 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
100196301 (ncbp2)
03015 mRNA surveillance pathway
100196301 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196301 (ncbp2)
03041 Spliceosome [BR:
sasa03041
]
100196301 (ncbp2)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
100196301 (ncbp2)
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
Cap binding complex
100196301 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100196301
NCBI-ProteinID:
NP_001134802
UniProt:
B5XDN3
LinkDB
All DBs
Position
ssa10:48406734..48408865
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AA seq
153 aa
AA seq
DB search
MSIKLNALFSDSYVDVSQYRDQHFKGNRYEQEKLLKQANTLYVGNLSFYTTEEQVYELFS
KSGDVKRIIIGLDKVKKTACGFCFVEYYTRTDAENAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVNLHRRNECLLPQRQQQLYIS
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaaattgaatgcgctattcagcgactcctacgttgatgtaagccaatacaga
gaccaacattttaagggaaatcgatatgagcaagagaaactgctgaaacaggctaacaca
ctctatgtgggtaacctgtccttttacaccacagaggaacaagtgtacgagctcttctcc
aagagtggggatgtgaaaagaataatcatcggcctagataaggtgaagaagacggcgtgt
ggcttctgcttcgtcgaatactacacgcgtacagatgctgaaaatgctatgaggtttgtc
aacgggacacgtctggatgaccgcatcatcagaactgactgggacgctggttttaaagag
ggcaggcagtatggccgtggcaagtccggtggtcaggtaaatttacacaggagaaatgaa
tgtttactacctcagagacaacaacagttgtatattagttag
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