KEGG   Salmo salar (Atlantic salmon): 100196346
Entry
100196346         CDS       T04363                                 
Symbol
arpc5l, arp5l
Name
(RefSeq) actin related protein 2/3 complex subunit 5 like
  KO
K05754  actin related protein 2/3 complex, subunit 5
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04144  Endocytosis
sasa04530  Tight junction
sasa04810  Regulation of actin cytoskeleton
sasa05100  Bacterial invasion of epithelial cells
sasa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100196346 (arpc5l)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100196346 (arpc5l)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100196346 (arpc5l)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100196346 (arpc5l)
   05100 Bacterial invasion of epithelial cells
    100196346 (arpc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sasa04131]
    100196346 (arpc5l)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sasa04812]
    100196346 (arpc5l)
Membrane trafficking [BR:sasa04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    100196346 (arpc5l)
Cytoskeleton proteins [BR:sasa04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     100196346 (arpc5l)
SSDB
Motif
Pfam: P16-Arc Utp12 Phage_antiter_Q
Other DBs
NCBI-GeneID: 100196346
NCBI-ProteinID: NP_001134847
UniProt: B5XE62
LinkDB
Position
ssa01:complement(145930992..145934109)
AA seq 150 aa
MAKNTLSSRFRKLDIDEFDENKFVDDHDEAVDNQGPDGAEIDNLIRQGDMMTAFHIALRN
PPVNTKNPAIKERALAIVLRVLTSFKSSDIEPAVKSLDRSGVDLLMKYIYRGFEKPSDNS
SAILLQWHEKAFAVGGLGSIVRVLTARKTV
NT seq 453 nt   +upstreamnt  +downstreamnt
atggcgaaaaacactctttcgtcgcgattcaggaaactcgacatagatgaatttgatgag
aacaaattcgtggatgatcacgatgaggctgtcgacaatcaaggacccgacggcgcggag
atagacaacctcatcaggcaaggcgacatgatgacagcttttcacattgctctccggaac
cctcctgtcaacactaagaatccagcaataaaggaaagggctctggcaatagtgctgaga
gtgttgacgtcattcaagtccagcgatatcgagccagctgtcaagtcgctagacagaagc
ggggtggacctgcttatgaagtacatatatagaggcttcgagaagccctctgacaatagc
agtgccattctcctacagtggcacgaaaaggctttcgcagttgggggcttagggtcaatc
gtaagagttctgaccgcccgaaagacagtttga

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