Salmo salar (Atlantic salmon): 100196363
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Entry
100196363 CDS
T04363
Symbol
taf11
Name
(RefSeq) TATA-box binding protein associated factor 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100196363 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
100196363 (taf11)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100196363 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
100196363
NCBI-ProteinID:
NP_001134864
UniProt:
B5XED7
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All DBs
Position
ssa15:79349414..79351252
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AA seq
203 aa
AA seq
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MADPARIKTESNSEKSLAARESPKTEDTEEVPVTSDADTESKDPSSQSLKREHKQDSVAG
DDEDEGTSDQPASKKLKVEPEKKKEKRQKVDEDEIQKMQVLVSSFSEEQLNRYEMYRRSA
FPKAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGDTPPLQPKHMR
EAVRRLKSREQIPNTKHKNILFH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccagctaggataaagactgaatccaactcggagaaatcattggctgctaga
gaaagccctaaaaccgaagacactgaagaagtgcctgtgacctcggatgcagacaccgaa
tcaaaagatccctcctcacaatcactcaaacgcgaacacaaacaggactctgtggctgga
gatgatgaggatgagggaacctcagatcaacctgcttccaaaaaactaaaagtggagcct
gagaagaaaaaggagaagcgccaaaaggttgacgaggatgagatacagaagatgcaggtt
ttggtctcatctttctctgaggagcagcttaaccgctatgagatgtatagacgctctgct
ttccccaaagctgccatcaagaggctgatacagtccattacaggatcctcagtctctcaa
aatgtggttatcgccatgtctggtatttccaaggtcttcgctggagaaatagtggaggaa
gctctggatgtgtgtgagaagtggggggacacgcctcccctgcagcccaagcacatgagg
gaggctgtcaggaggctgaagagcagagagcagatccccaacaccaagcacaagaacatc
ctcttccactga
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