KEGG   Salmo salar (Atlantic salmon): 100196391
Entry
100196391         CDS       T04363                                 
Symbol
exosc7, exos7
Name
(RefSeq) exosome component 7
  KO
K12589  exosome complex component RRP42
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100196391 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100196391 (exosc7)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100196391 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     100196391 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100196391
NCBI-ProteinID: NP_001134892
UniProt: B5XER9
LinkDB
Position
ssa27:3185623..3195381
AA seq 291 aa
MATVQVSEAEKVYILHGVRDDLRVDGRGCEDYRHMEIETEMVSNTDGSAKVTLGHTDVLV
GVKAEMGKPRPMVPGEGYLEFFVDCSANATPEFEGRGGDELGMELSNTLYKVFNNRYSVD
LKSLCISPGEHCWVLYVDVLLLQCDGNLFDAISVAIKAALFNTKIPKVHISEDEEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTRKGTVTCVR
KVGGGSLDPESIFEMTETGKRVGKALHAPLMQLLQEEESLGKKRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggctactgtacaagtcagtgaggctgaaaaggtgtatattttgcatggtgtacgggat
gacttacgggttgatggacgaggatgcgaggactacagacacatggagattgagacagaa
atggtgtcaaatacagatggctcagccaaagtgacactggggcatacagacgtgctagtg
ggagtcaaagctgaaatgggaaagccaaggcccatggtcccaggtgaaggctacctggag
ttttttgttgattgctctgccaatgccacaccagaatttgaaggtcggggtggtgatgag
ctgggcatggagttgagcaacaccctctacaaagtgttcaacaacagatacagtgtggac
ctgaaaagcctctgcatcagcccaggggaacactgttgggtgctctatgtggacgtgctg
ctcctgcagtgtgatggaaatctttttgatgccatctctgttgccattaaagcagctctc
ttcaatacaaaaattcccaaagtgcacatctctgaggatgaggaaggagggaaggaaatc
gagctgtcagacgacccctatgactgcatgcgactcaatgtggagaacgttccctgcatc
gtgaccttgtgcaaggtgggccataggcacgtggtggatgccacgctgcaggagaaggcg
tgttcagtggccagcctaatcatctctgtcacacgcaaggggacggtcacctgtgtcagg
aaggtggggggaggcagcctggacccagagagcatctttgagatgacagagacagggaaa
cgagtagggaaagccctccacgcccccctcatgcagcttctgcaggaggaggagagtctg
ggaaagaagagacagaaagtgggctttcttggttag

DBGET integrated database retrieval system