Salmo salar (Atlantic salmon): 100196422
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Entry
100196422 CDS
T04363
Symbol
cetn1
Name
(RefSeq) Centrin-1
KO
K10840
centrin-2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100196422 (cetn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196422 (cetn1)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100196422 (cetn1)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100196422 (cetn1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
100196422 (cetn1)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100196422 (cetn1)
Centrosome duplication proteins
Centriole replication proteins
100196422 (cetn1)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100196422 (cetn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_5
AIF-1
EF_EFCAB10_C
EH
Dockerin_1
SurA_N_3
HerA_C
SurA_N_2
DUF7645
SUB1_ProdP9
SRI
DUF5580_M
MJ1010-like_2nd
LETM1_RBD
CNNM
Motif
Other DBs
NCBI-GeneID:
100196422
NCBI-ProteinID:
NP_001134923
UniProt:
B5XF65
LinkDB
All DBs
Position
ssa09:complement(58659871..58665439)
Genome browser
AA seq
171 aa
AA seq
DB search
MASGFRKPNTTSNQRKKAGPKPDLTEEQKQEIREAFDLFDTDGSGTIDVKELKVAMRALG
FEPKKEEIKKMIADIDKEGSGTIDFNDFLCMMTQKMSEKDSKEEILKAFRLFDDDGTGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggcttcagaaaacccaacaccacttccaatcagaggaaaaaggcaggtcct
aaaccagacttgacagaggaacaaaagcaggagatcagagaggcctttgacttgtttgat
acagatgggtcgggcacaattgacgtgaaggaactcaaggttgccatgcgtgcccttggc
tttgaaccaaagaaagaagagatcaagaagatgattgcagacattgacaaggagggctct
gggaccattgattttaatgactttctctgtatgatgacacagaaaatgagtgaaaaagac
tcaaaagaagaaattctgaaggctttccgcttatttgacgatgacggcacgggcaaaatc
tccttcaaaaatctcaagagagttgccaaggagctaggcgaaaacctgacagatgaggaa
ttgcaggaaatgattgatgaagcagaccgagatggggatggagagatcaacgagcaggag
tttctaaggataatgaaaaagacaagtctatattga
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integrated database retrieval system