KEGG   Salmo salar (Atlantic salmon): 100196422
Entry
100196422         CDS       T04363                                 
Symbol
cetn1
Name
(RefSeq) Centrin-1
  KO
K10840  centrin-2
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    100196422 (cetn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    100196422 (cetn1)
   03036 Chromosome and associated proteins [BR:sasa03036]
    100196422 (cetn1)
   03400 DNA repair and recombination proteins [BR:sasa03400]
    100196422 (cetn1)
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     100196422 (cetn1)
Chromosome and associated proteins [BR:sasa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    100196422 (cetn1)
   Centrosome duplication proteins
    Centriole replication proteins
     100196422 (cetn1)
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      100196422 (cetn1)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF_EFCAB10_C EH Dockerin_1 SurA_N_3 HerA_C SurA_N_2 DUF7645 SUB1_ProdP9 SRI DUF5580_M MJ1010-like_2nd LETM1_RBD CNNM
Other DBs
NCBI-GeneID: 100196422
NCBI-ProteinID: NP_001134923
UniProt: B5XF65
LinkDB
Position
ssa09:complement(58659871..58665439)
AA seq 171 aa
MASGFRKPNTTSNQRKKAGPKPDLTEEQKQEIREAFDLFDTDGSGTIDVKELKVAMRALG
FEPKKEEIKKMIADIDKEGSGTIDFNDFLCMMTQKMSEKDSKEEILKAFRLFDDDGTGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcttcaggcttcagaaaacccaacaccacttccaatcagaggaaaaaggcaggtcct
aaaccagacttgacagaggaacaaaagcaggagatcagagaggcctttgacttgtttgat
acagatgggtcgggcacaattgacgtgaaggaactcaaggttgccatgcgtgcccttggc
tttgaaccaaagaaagaagagatcaagaagatgattgcagacattgacaaggagggctct
gggaccattgattttaatgactttctctgtatgatgacacagaaaatgagtgaaaaagac
tcaaaagaagaaattctgaaggctttccgcttatttgacgatgacggcacgggcaaaatc
tccttcaaaaatctcaagagagttgccaaggagctaggcgaaaacctgacagatgaggaa
ttgcaggaaatgattgatgaagcagaccgagatggggatggagagatcaacgagcaggag
tttctaaggataatgaaaaagacaagtctatattga

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