Salmo salar (Atlantic salmon): 100196438
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Entry
100196438 CDS
T04363
Symbol
tba1a
Name
(RefSeq) Tubulin alpha-1A chain
KO
K07374
tubulin alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04210
Apoptosis
sasa04530
Tight junction
sasa04540
Gap junction
sasa04814
Motor proteins
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100196438 (tba1a)
09143 Cell growth and death
04210 Apoptosis
100196438 (tba1a)
09144 Cellular community - eukaryotes
04530 Tight junction
100196438 (tba1a)
04540 Gap junction
100196438 (tba1a)
09142 Cell motility
04814 Motor proteins
100196438 (tba1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100196438 (tba1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196438 (tba1a)
03036 Chromosome and associated proteins [BR:
sasa03036
]
100196438 (tba1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sasa04812
]
100196438 (tba1a)
04147 Exosome [BR:
sasa04147
]
100196438 (tba1a)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100196438 (tba1a)
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100196438 (tba1a)
Cytoskeleton proteins [BR:
sasa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100196438 (tba1a)
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100196438 (tba1a)
Exosomal proteins of other body fluids (saliva and urine)
100196438 (tba1a)
Exosomal proteins of colorectal cancer cells
100196438 (tba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100196438
NCBI-ProteinID:
NP_001134939
UniProt:
B5XFE9
LinkDB
All DBs
Position
ssa16:complement(41321370..41324922)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGAQMGNACWELYCLEHGIQPDGRMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGGGMEEGEFSE
AREDMAALEKDYEEVGTDSIGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatgcatgtcggtcaggccggagcccagatgggtaatgcatgc
tgggaattgtactgcctagagcatgggatccagcctgacggacggatgcccagtgataag
acaatcggagggggagatgactccttcaacaccttcttcagtgagactggggctggtaaa
catgttcctcgtgcagtctttgtagacctggagccaaccgttatcgatgaggtacgcaca
ggtacctaccgccagctgttccaccctgagcagctgatcacaggcaaggaggacgctgcc
aacaactatgcccgtggtcactacaccattggcaaggagatcatcgacctggtactcgat
aggacgcgcaaactggctgaccagtgcactggtctccagggcttcctgatcttccacagc
tttggaggaggcaccggttctgggttcacctccctgttgatggaacgtctctctgtcgac
tatgggaagaagtccaagcttgaatttgctgtttaccctgctccccaagtttctactgct
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgatatctgccgcaggaacctggacattgag
cgccccacctacaccaacctcaacaggctgattggtcagatcgtctcctccatcaccgcc
tccctgcgtttcgacggggccctcaatgtggacctgacagagttccagaccaacttggtg
ccttacccccgtatccacttccctctggccacctatgctccagtcatctctgctgagaag
gcctaccatgagcagctgtctgttgctgacatcaccaacgcctgctttgagccagccaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgcctgctctaccgt
ggtgacgttgtgcccaaagatgtcaactctgccatcgccacaatcaagaccaagcgcacc
atccagtttgtggactggtgtcccactggcttcaaggtcggtatcaactaccagccaccc
acagtggtccctggaggagatctggccaaggtccagagagctgtgtgcatgctgagcaac
accaccgccatcgctgaggcctgggccaggcttgaccacaagtttgatctgatgtacgca
aagagagcttttgtgcactggtatgtgggagggggcatggaggagggagagttctcagag
gccagagaggacatggcagccctggagaaggactatgaagaggtgggtactgacagcatc
ggagaagaggatgaagaaggagaggagtactaa
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