Salmo salar (Atlantic salmon): 100196522
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Entry
100196522 CDS
T04363
Symbol
tia1
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
100196522 (tia1)
03041 Spliceosome [BR:
sasa03041
]
100196522 (tia1)
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100196522 (tia1)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100196522 (tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
100196522
NCBI-ProteinID:
NP_001135023
UniProt:
B5XGE1
LinkDB
All DBs
AA seq
409 aa
AA seq
DB search
MAYGGPIYSASLAADIPQSGSTLHIGNIHSAVDENVLVSILQQFFPGQGFQCKLFPDPNN
SPDLYCFMTFADVNTATSALSILNGREVMGKKLKVSWASGGAGQFKQSQISGTTHSIYVG
DLPHECDDNMLAQAFRPFGEVLSSRVVRDPESGLSKGFGFIVYRHQYEAEEAIQKMHGGT
ISSKSVKVSWATRSKATTSVPQLNYNDVYQQSGAHNTTLYVGNLPESMKEQFLISFFEPY
GAVLDTKIFHDKHFAFIKMDTHEAAATSIVKCNGQPVDGCVMKVWWSRDNPNLQGNMPSN
PAPQPTYMGSVPSSYGVSGANPSTMPYQSYYGYYNAAALAANPHLQQQYNAYAAQYYQMY
SANPAAAAAAYGSYPYGAQQTTHQTSSPSAYANQQPPSAGPDHNNQNNQ
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcatatggtgggccgatttattctgcttcactagcagctgacatacctcagtctggt
tctacgctacatattggcaatattcatagtgctgtagatgagaatgtgctcgtgtctatt
ttacaacaatttttccctgggcagggcttccagtgcaagctttttcctgatccaaacaat
agtcctgatttgtattgttttatgacatttgccgatgttaacactgccacttctgcgtta
tcgatcttgaatgggagagaagtgatgggaaagaagcttaaggtcagctgggctagtggt
ggtgctggtcagttcaaacaatcccaaatatccggaaccactcactcaatctatgtcgga
gatcttcctcacgagtgcgatgacaatatgttggcccaggcgtttaggccttttggcgaa
gttttgagttctcgcgtcgtgcgcgatcctgaaagtggtctcagcaaaggatttgggttt
attgtctatagacaccaatacgaagccgaagaagctatacaaaagatgcacggcggaaca
attagctcaaaaagcgtcaaagtcagctgggcaacacgctccaaagccaccacctcggtt
ccacaactcaactataacgatgtctatcaacagtccggcgcccacaataccacactgtat
gtgggaaatctgcccgaatcaatgaaggaacaatttttgatctctttcttcgagccatat
ggcgcagtgctggacacaaaaatattccacgacaaacactttgcgtttataaaaatggac
acgcatgaagccgccgccacatccatcgtcaagtgcaacggccagccggtggacggttgc
gtcatgaaagtgtggtggtcccgagataaccccaatctacaaggaaacatgccctcaaat
ccagccccacaaccaacctatatgggcagcgttccctcgtcgtacggagtttccggcgct
aatccctcaacaatgccataccaatcctattacggctattacaatgcagcagctctagcc
gcaaatccccacctacaacagcagtataatgcgtacgccgcccaatactatcaaatgtac
agtgcaaaccccgccgccgctgcagccgcctacgggtcctatccttatggagcgcaacaa
accacccaccaaacaagcagcccctccgcatacgccaaccaacaaccaccgtccgccgga
cccgaccacaacaatcagaacaaccaatag
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